1
vote
1
answer
66
views
1
answer
post hoc analysis on nested model
edger nested design post hoc written 6 weeks ago by ashley.lu0 • updated 5 weeks ago by Aaron Lun20k
2
votes
1
answer
110
views
1
answer
Up/Down Regulated GeneList from edgeR and R
edger R genelist up reg written 6 weeks ago by drskm70 • updated 6 weeks ago by Gordon Smyth34k
6
votes
2
answers
124
views
2
answers
6
votes
1
answer
109
views
1
answer
2
votes
1
answer
76
views
1
answer
5
votes
2
answers
175
views
2
answers
2
votes
2
answers
106
views
2
answers
3
votes
1
answer
105
views
1
answer
Calling svaseq() multiple times
limma edger sva svaseq written 7 weeks ago by cats_dogs0 • updated 7 weeks ago by Ryan C. Thompson6.8k
0
votes
0
answers
80
views
0
answers
processAmplicons to match sequences 1 or 2 bases shorter than guides?
edger processamplicons written 8 weeks ago by sdalin0 • updated 7 weeks ago by shepherl ♦♦ 640
4
votes
1
answer
128
views
1
answer
0
votes
1
answer
326
views
1
answer
EdgeR: run processAmplicons without barcodes
edger processamplicons crispr barcode written 16 months ago by neggersjasper0 • updated 8 weeks ago by sdalin0
3
votes
2
answers
94
views
2
answers
single continuous factor
edger design matrix continuous written 9 weeks ago by ashley.lu0 • updated 8 weeks ago by Gordon Smyth34k
6
votes
2
answers
237
views
2
answers
2
votes
2
answers
102
views
2
answers
4
votes
2
answers
233
views
2
answers
0
votes
2
answers
142
views
2
answers
edgeR and DESeq2
edger deseq2 written 9 weeks ago by yueli70 • updated 9 weeks ago by Gordon Smyth34k
4
votes
2
answers
132
views
2
answers
how to calculate the logFC value
edger written 9 weeks ago by yueli70 • updated 9 weeks ago by Gordon Smyth34k
2
votes
1
answer
99
views
1
answer
no replicates data
edger written 9 weeks ago by yueli70 • updated 9 weeks ago by Gordon Smyth34k
3
votes
1
answer
95
views
1
answer
5
votes
1
answer
122
views
1
answer
Nested design in edgeR
edger written 10 weeks ago by ashley.lu0 • updated 10 weeks ago by Gordon Smyth34k
2
votes
1
answer
111
views
1
answer
Principle component analysis plot with gene expression data
rnaseq edger R pca ggbiplot written 10 weeks ago by Biologist70 • updated 10 weeks ago by James W. MacDonald46k
0
votes
1
answer
187
views
1
answer
TPM data Differential expression analysis
limma edger differential gene expression written 10 weeks ago by ghmdsr0 • updated 10 weeks ago by Gordon Smyth34k
5
votes
1
answer
237
views
1
answer
Filtering for ATAC-seq
edger cqn atac-seq written 10 weeks ago by shankasal0 • updated 10 weeks ago by Aaron Lun20k
5
votes
2
answers
149
views
2
answers
0
votes
1
answer
94
views
1
answer
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