Showing: edgerreset
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1
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84
views
1
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How to create two columns for model matrix used in limma?
limma edger written 9 weeks ago by Ahdee40 • updated 9 weeks ago by Gordon Smyth38k
6
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2
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190
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7
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1
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195
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1
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RNA-seq normalization without filtering
rnaseq normalization edger deseq2 written 10 weeks ago by Lin50 • updated 10 weeks ago by Steve Lianoglou12k
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264
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0
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1
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151
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1
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design matrix for 4 groups in edgeR
edger written 10 weeks ago by sandraggava0 • updated 10 weeks ago by Gordon Smyth38k
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144
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0
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0
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2
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140
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edgeR DGEList and design matrix
edger dge written 10 weeks ago by ctstackh0 • updated 10 weeks ago by Yunshun Chen490
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135
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1
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0
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1
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126
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1
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EdgeR mistake- dispersion
edger written 11 weeks ago by trumbia0 • updated 10 weeks ago by Gordon Smyth38k
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2
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230
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6 follow
2
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goana and "No annotated genes found in universe" even with Entrez gene ids
edger goana written 12 weeks ago by matrs10 • updated 12 weeks ago by Gordon Smyth38k
3
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1
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171
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1
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4
votes
1
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128
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1
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normalization of RNA-seq data after over-expressing the transcription factors
limma edger deseq2 voom written 12 weeks ago by Bogdan580 • updated 12 weeks ago by Aaron Lun25k
1
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184
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1
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Feedback on edgeR model setup: identifying sex-by-tissue effects
edger written 3 months ago by spflanagan.phd0 • updated 3 months ago by Aaron Lun25k
2
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1
answer
157
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1
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RNA-Seq normalization for co-expression analysis
limma edger wgcna written 3 months ago by Lin50 • updated 3 months ago by Gordon Smyth38k
4
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1
answer
144
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1
answer
5
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2
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307
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2
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Difference of difference, paired design
limma edger deseq2 written 3 months ago by Bloodgas0 • updated 3 months ago by swbarnes2330
1
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1
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128
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1
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0
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0
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83
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0
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adding batch effects as a covariate in additive model in edgeR
edger batch effects written 3 months ago by Victoria0 • updated 3 months ago by James W. MacDonald51k
4
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1
answer
168
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1
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Complex multifactorial design with random effects in Limma/voom
limma edger written 3 months ago by joasmile8410 • updated 3 months ago by Aaron Lun25k
0
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1
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176
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1
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3
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3
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444
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10 follow
3
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0
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2
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129
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2
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FNR in RNASeq
edger deseq2 written 3 months ago by prat0 • updated 3 months ago by Gordon Smyth38k
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2
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119
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2
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Normalized count in edger
edger written 3 months ago by mzillur0 • updated 3 months ago by theodore.georgomanolis0
2
votes
1
answer
148
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1
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Majority upregulated genes in edgeR
edger differential expression genes fold change written 3 months ago by ilovesuperheroes19930 • updated 3 months ago by Aaron Lun25k
1
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1
answer
154
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1
answer
adjusting for confounding effects in edgeR
edger confounding written 3 months ago by Victoria0 • updated 3 months ago by Aaron Lun25k
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