2
votes
1
answer
58
views
1
answer
EdgeR: Prior degrees of freedom effect on tag wise dispersion
rnaseq edger R rna-seq written 1 day ago by r.beeloo0 • updated 1 day ago by Aaron Lun19k
1
vote
1
answer
108
views
1
answer
Comparison between limma and edgeR of reads ratio
limma edger offset written 3 days ago by catpaw.tw0 • updated 2 days ago by Aaron Lun19k
1
vote
1
answer
45
views
1
answer
4
votes
1
answer
66
views
1
answer
1
vote
2
answers
41
views
2
answers
4
votes
1
answer
58
views
1
answer
8
votes
2
answers
78
views
2
answers
read counts for gene families
edger written 7 days ago by zhou_hye10 • updated 7 days ago by Gordon Smyth33k
4
votes
2
answers
71
views
2
answers
5
votes
1
answer
51
views
1
answer
edgeR normalisation factors different between experimental groups
edger written 11 days ago by maltethodberg50 • updated 11 days ago by Aaron Lun19k
1
vote
1
answer
75
views
1
answer
2
votes
1
answer
49
views
1
answer
0
votes
1
answer
377
views
1
answer
Differential expression testing for groups with unequal variances/dispersions?
edger written 4.9 years ago by Ryan C. Thompson6.5k • updated 14 days ago by sgupt460
4
votes
1
answer
74
views
1
answer
How does edgeR cpm function calculate log(CPM) values?
edger cpm written 17 days ago by jxb.dev0 • updated 17 days ago by James W. MacDonald46k
0
votes
1
answer
50
views
1
answer
error: NA counts not permitted
edger systempiper rna-seq written 18 days ago by clarisbaby0 • updated 18 days ago by Aaron Lun19k
3
votes
2
answers
89
views
2
answers
EdgeR model formula design matrix
edger design matrix paired samples written 19 days ago by aiko0 • updated 18 days ago by Aaron Lun19k
4
votes
1
answer
68
views
1
answer
0
votes
1
answer
64
views
1
answer
filtering lowly expressed genes before or after normalization?
edger tximport written 4 weeks ago by burcu.atasu0 • updated 4 weeks ago by Michael Love17k
0
votes
1
answer
80
views
1
answer
6
votes
1
answer
119
views
1
answer
0
votes
0
answers
55
views
0
answers
0
votes
0
answers
34
views
0
answers
0
votes
1
answer
100
views
1
answer
edgeR design matrix
edger design and contrast matrix design matrix written 5 weeks ago by cafelumiere1220 • updated 5 weeks ago by Gordon Smyth33k
3
votes
1
answer
116
views
1
answer
0
votes
0
answers
52
views
0
answers
1
vote
1
answer
81
views
1
answer
EdgeR model matrix: interaction term
edger written 5 weeks ago by fcamus0 • updated 5 weeks ago by Aaron Lun19k
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