3
votes
1
answer
50
views
1
answer
Cannot retrieve DE genes from goana GO terms
limma edger goana written 2 days ago by b.nota300 • updated 2 days ago by Aaron Lun20k
4
votes
1
answer
40
views
1
answer
edgeR coefficients for DEG analysis
edger written 2 days ago by nonCodingGene10 • updated 2 days ago by James W. MacDonald46k
0
votes
1
answer
46
views
1
answer
weights must be finite positive value
edger estimatedispersions written 4 days ago by nonCodingGene10 • updated 4 days ago by Aaron Lun20k
0
votes
0
answers
24
views
0
answers
2
votes
2
answers
88
views
2
answers
3
votes
1
answer
147
views
1
answer
5
votes
1
answer
141
views
1
answer
0
votes
1
answer
56
views
1
answer
4
votes
1
answer
50
views
1
answer
Differential profile for only one normal - tumor pair
edger paired design degs written 17 days ago by takumima10 • updated 17 days ago by Gordon Smyth34k
4
votes
1
answer
48
views
1
answer
2
votes
1
answer
67
views
1
answer
edgeR: design matrix for methylation analysis
edger methylation written 18 days ago by sgld0 • updated 18 days ago by Gordon Smyth34k
1
vote
0
answers
51
views
0
answers
0
votes
1
answer
70
views
1
answer
Identify the normalized count from differential expression
edger written 19 days ago by shuklashweta330 • updated 19 days ago by Gordon Smyth34k
2
votes
1
answer
71
views
1
answer
Batch Variation-MDS Plot
edger R batch effect written 26 days ago by drskm70 • updated 19 days ago by Gordon Smyth34k
0
votes
1
answer
48
views
1
answer
0
votes
1
answer
74
views
1
answer
unexpected p-value histogram in edgeR
edger p-value distribution written 25 days ago by approximately.random0 • updated 25 days ago by Ryan C. Thompson6.8k
1
vote
1
answer
53
views
1
answer
edgeR: problem with the quasi-likelihood F-test
edger glmqlftest written 25 days ago by Estel Kitsune0 • updated 25 days ago by Aaron Lun20k
1
vote
1
answer
59
views
1
answer
1
vote
1
answer
75
views
1
answer
EdgeR analysis of bottlenecked genetic screen data
edger written 26 days ago by knaxerova10 • updated 26 days ago by Aaron Lun20k
1
vote
1
answer
41
views
1
answer
How to extract genes with greatest BCV?
edger written 26 days ago by Mich0 • updated 26 days ago by Aaron Lun20k
4
votes
1
answer
104
views
1
answer
3
votes
1
answer
92
views
1
answer
3
votes
1
answer
77
views
1
answer
edgeR: setting up proper contrasts for interactions
limma edger written 4 weeks ago by fcamus0 • updated 4 weeks ago by Aaron Lun20k
7
votes
2
answers
179
views
2
answers
Differentially expressed genes selection with FC and FDR cutoff
rnaseq edger R bioconductor written 4 weeks ago by Beginner50 • updated 4 weeks ago by Gordon Smyth34k
1
vote
1
answer
73
views
1
answer
How to change sample names in featureCounts or edgeR
edger featurecounts written 5 weeks ago by Gary0 • updated 5 weeks ago by Gordon Smyth34k
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