10
votes
1
answer
2.0k
views
5 follow
1
answer
Bootstrap confidence intervals on RNA-seq expression from Kallisto
rnaseq limma edger deseq2 voom written 3.1 years ago by Sean Davis21k • updated 10 months ago by Paul Harrison60
14
votes
1
answer
3.0k
views
5 follow
1
answer
Differences between limma voom E values and edgeR cpm values?
edger written 4.1 years ago by John Brothers II60 • updated 3.8 years ago by Gordon Smyth34k
18
votes
2
answers
3.4k
views
8 follow
2
answers
Confidence intervals on edgeR logFC
edger statistics confidence interval written 3.8 years ago by ri.lars40 • updated 2.3 years ago by nwvidal0
18
votes
2
answers
1.3k
views
2
answers
13
votes
2
answers
1.6k
views
8 follow
2
answers
14
votes
6
answers
2.2k
views
10 follow
6
answers
Diffbind: edgeR or DESeq2 ?
edger diffbind deseq2 medip-seq written 2.3 years ago by florian.noack60 • updated 8 months ago by Rory Stark2.5k
3
votes
1
answer
790
views
1
answer
non-integer counts for edgeR
edger written 6.2 years ago by Gordon Smyth34k
11
votes
4
answers
1.1k
views
6 follow
4
answers
11
votes
5
answers
6.3k
views
7 follow
5
answers
RNA-Seq, generate batch-free count matrix
edger sva written 4.0 years ago by Brian Haas60 • updated 3.8 years ago by Gordon Smyth34k
7
votes
1
answer
876
views
5 follow
1
answer
Using edgeR on pre-post treatment control design
edger complex-design written 3.8 years ago by lwc62820 • updated 3.8 years ago by James W. MacDonald46k
20
votes
2
answers
9.2k
views
5 follow
2
answers
6
votes
4
answers
1.2k
views
4
answers
12
votes
1
answer
1.4k
views
7 follow
1
answer
edgeR glmLRT with test="F"?
edger differential expression dge written 3.1 years ago by Ryan C. Thompson6.8k • updated 3.1 years ago by Aaron Lun20k
8
votes
1
answer
630
views
1
answer
NaN results on some pathways in CAMERA
edger camera pathway analysis written 3.1 years ago by Ryan C. Thompson6.8k • updated 3.1 years ago by Gordon Smyth34k
8
votes
1
answer
1.1k
views
5 follow
1
answer
25
votes
2
answers
3.9k
views
2
answers
Normalization methodology in DESeq/DESeq2 vs edgeR
normalization edger deseq deseq2 written 2.7 years ago by Nik Tuzov60 • updated 2.7 years ago by Simon Anders3.5k
12
votes
3
answers
1.0k
views
5 follow
3
answers
6
votes
2
answers
521
views
2
answers
4
votes
5
answers
539
views
5
answers
3
votes
1
answer
540
views
1
answer
Hill in P-value distribution for heterogenous ChIP-seq samples
limma edger sva csaw qsmooth written 17 months ago by jma199130 • updated 17 months ago by Aaron Lun20k
2
votes
2
answers
1.3k
views
2
answers
edgeR - technical and biological replication
edger written 8.2 years ago by Jakob Hedegaard160 • updated 8.2 years ago by Gordon Smyth34k
1
vote
0
answers
965
views
0
answers
dispersion in edgeR
sequencing edger written 8.1 years ago by Gordon Smyth34k
1
vote
0
answers
666
views
0
answers
BaseCounts & edgeR
limma edger deseq written 6.5 years ago by Gordon Smyth34k
3
votes
2
answers
2.5k
views
2
answers
edgeR reading data
edger written 6.3 years ago by Wang, Li180 • updated 6.3 years ago by Gordon Smyth34k
2
votes
1
answer
6.0k
views
1
answer
How can I get the normalized read counts from TMM?
normalization edger written 5.8 years ago by Reanne Bowlby20 • updated 5.8 years ago by Mark Robinson870
<prev • 1,307 results • page 1 of 53 • next >

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.2.0
Traffic: 149 users visited in the last hour