Showing: edgerreset
13
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8 follow
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11
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16
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11 follow
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Diffbind: edgeR or DESeq2 ?
edger diffbind deseq2 medip-seq written 3.0 years ago by florian.noack60 • updated 16 months ago by Rory Stark2.7k
1
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0
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1.2k
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0
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dispersion in edgeR
sequencing edger written 8.7 years ago by Gordon Smyth36k
5
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1
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1.0k
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1
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non-integer counts for edgeR
edger written 6.8 years ago by Gordon Smyth36k
1
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1
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610
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1
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edgeR: Using ratios (translational efficiencies) as input
rnaseq edger written 5.9 years ago by gowtham210 • updated 5.9 years ago by Gordon Smyth36k
1
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1
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2.0k
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1
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Defining the model matrix for a multi-factorial design with interactions - edgeR
edger written 5.2 years ago by Guest User12k • updated 5.2 years ago by Ryan C. Thompson7.2k
1
vote
1
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3.1k
views
7 follow
1
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limma-voom
rnaseq normalization limma edger written 5.1 years ago by Ming Yi350 • updated 5.1 years ago by Gordon Smyth36k
1
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1
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1.0k
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1
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questions on edgeR package
rnaseq edger rsubread written 5.1 years ago by Gordon Smyth36k • updated 5.1 years ago by Yi, Ming NIH/NCI [C]100
12
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5
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7.4k
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9 follow
5
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RNA-Seq, generate batch-free count matrix
edger sva written 4.7 years ago by Brian Haas90 • updated 4.4 years ago by Gordon Smyth36k
1
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1
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1.4k
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1
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Multifactor model design for DE analysis (DESeq2 & edgeR)
cancer edger deseq2 written 4.6 years ago by Mathieu Bahin30 • updated 4.6 years ago by Simon Anders3.5k
7
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1
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5 follow
1
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Using edgeR on pre-post treatment control design
edger complex-design written 4.4 years ago by lwc62820 • updated 4.4 years ago by James W. MacDonald49k
3
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1
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1.7k
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1
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edgeR setting up glm/contrasts/ANOVA-like tests
rnaseq edger written 4.4 years ago by ericalarson10 • updated 4.4 years ago by Aaron Lun23k
6
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4
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1.6k
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4
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10
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1
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2.9k
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GLM Likelihood ratio test
rnaseq edger glm written 4.1 years ago by ygowtha0 • updated 4.1 years ago by Gordon Smyth36k
4
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1
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1.4k
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1
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treatDGE vs glmLRT
edger written 4.0 years ago by jet202010 • updated 4.0 years ago by James W. MacDonald49k
13
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6
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8.2k
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8 follow
6
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5
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4
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3.2k
views
4
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10
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1
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2.4k
views
5 follow
1
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Bootstrap confidence intervals on RNA-seq expression from Kallisto
rnaseq limma edger deseq2 voom written 3.8 years ago by Sean Davis21k • updated 18 months ago by Paul Harrison70
12
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1
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1.8k
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7 follow
1
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edgeR glmLRT with test="F"?
edger differential expression dge written 3.8 years ago by Ryan C. Thompson7.2k • updated 3.8 years ago by Aaron Lun23k
8
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1
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747
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1
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NaN results on some pathways in CAMERA
edger camera pathway analysis written 3.8 years ago by Ryan C. Thompson7.2k • updated 3.8 years ago by Gordon Smyth36k
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4.6k
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0
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18
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7
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10
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2.2k
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5 follow
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