Showing: edgerreset
13
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2
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2.4k
views
9 follow
2
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11
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4
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1.8k
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6 follow
4
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16
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6
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3.3k
views
11 follow
6
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Diffbind: edgeR or DESeq2 ?
edger diffbind deseq2 medip-seq written 3.6 years ago by florian.noack60 • updated 23 months ago by Rory Stark2.8k
12
votes
2
answers
1.8k
views
9 follow
2
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differential expression analysis of htseq data with edgeR/voom
limma edger voom htseq rnaseq123 written 2.3 years ago by wd30 • updated 9 months ago by Gordon Smyth38k
1
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0
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1.5k
views
0
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dispersion in edgeR
sequencing edger written 9.3 years ago by Gordon Smyth38k
5
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1
answer
1.2k
views
1
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non-integer counts for edgeR
edger written 7.4 years ago by Gordon Smyth38k
1
vote
1
answer
702
views
1
answer
edgeR: Using ratios (translational efficiencies) as input
rnaseq edger written 6.5 years ago by gowtham210 • updated 6.5 years ago by Gordon Smyth38k
1
vote
1
answer
2.3k
views
1
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Defining the model matrix for a multi-factorial design with interactions - edgeR
edger written 5.7 years ago by Guest User12k • updated 5.7 years ago by Ryan C. Thompson7.4k
1
vote
1
answer
3.3k
views
7 follow
1
answer
limma-voom
rnaseq normalization limma edger written 5.7 years ago by Ming Yi350 • updated 5.7 years ago by Gordon Smyth38k
1
vote
1
answer
1.1k
views
1
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questions on edgeR package
rnaseq edger rsubread written 5.7 years ago by Gordon Smyth38k • updated 5.7 years ago by Yi, Ming NIH/NCI [C]100
13
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5
answers
8.1k
views
10 follow
5
answers
RNA-Seq, generate batch-free count matrix
edger sva written 5.2 years ago by Brian Haas90 • updated 5.0 years ago by Gordon Smyth38k
1
vote
1
answer
1.4k
views
1
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Multifactor model design for DE analysis (DESeq2 & edgeR)
cancer edger deseq2 written 5.2 years ago by Mathieu Bahin30 • updated 5.2 years ago by Simon Anders3.6k
7
votes
1
answer
1.2k
views
5 follow
1
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Using edgeR on pre-post treatment control design
edger complex-design written 5.0 years ago by lwc62820 • updated 5.0 years ago by James W. MacDonald51k
3
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1
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1.8k
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1
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edgeR setting up glm/contrasts/ANOVA-like tests
rnaseq edger written 5.0 years ago by ericalarson10 • updated 5.0 years ago by Aaron Lun25k
6
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4
answers
1.8k
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4
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design matrix for 4 groups in edgeR
edger design written 4.9 years ago by alakatos110
5
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2
answers
1.9k
views
5 follow
2
answers
10
votes
1
answer
3.3k
views
1
answer
GLM Likelihood ratio test
rnaseq edger glm written 4.6 years ago by ygowtha0 • updated 4.6 years ago by Gordon Smyth38k
4
votes
1
answer
1.5k
views
1
answer
treatDGE vs glmLRT
edger written 4.6 years ago by jet202010 • updated 4.6 years ago by James W. MacDonald51k
13
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6
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8.8k
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8 follow
6
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5
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4
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3.3k
views
4
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10
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1
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2.6k
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5 follow
1
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Bootstrap confidence intervals on RNA-seq expression from Kallisto
rnaseq limma edger deseq2 voom written 4.3 years ago by Sean Davis21k • updated 2.1 years ago by Paul Harrison70
12
votes
1
answer
2.2k
views
7 follow
1
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edgeR glmLRT with test="F"?
edger differential expression dge written 4.3 years ago by Ryan C. Thompson7.4k • updated 4.3 years ago by Aaron Lun25k
8
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1
answer
819
views
1
answer
NaN results on some pathways in CAMERA
edger camera pathway analysis written 4.3 years ago by Ryan C. Thompson7.4k • updated 4.3 years ago by Gordon Smyth38k
2
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0
answers
5.0k
views
0
answers
18
votes
2
answers
1.8k
views
2
answers
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