Showing: edgerreset
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edgeR DEG how many treatments should be fitted to GLM
edger glm written 2 days ago by zhang.jianhai0 • updated 2 days ago by Gordon Smyth36k
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56
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edgeR DEG sample size
edger minimum samples written 3 days ago by jzhan0670 • updated 3 days ago by Gordon Smyth36k
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edgeR for time series
edger written 10 days ago by sharvari gujja20 • updated 8 days ago by Gordon Smyth36k
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Aclaration of batch effect adjust in DE analysis
rnaseq edger batch effect written 11 days ago by IRAIA.MAIALEN0 • updated 11 days ago by James W. MacDonald49k
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96
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Average read counts and batch-effect correction in edgeR
edger ngs rna-seq batch-effect read counts written 12 days ago by Roman 10 • updated 12 days ago by Aaron Lun22k
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118
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MDS Plot help in edgeR
edger differential gene expression mds mdsplot plotmds written 15 days ago by ilovesuperheroes19930 • updated 15 days ago by Gordon Smyth36k
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Odd P-value distribution in edgeR on RRBS data
edger rrbs written 20 days ago by ingerslev0 • updated 19 days ago by Gordon Smyth36k
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FDR does not change between genes in edgeR
rnaseq edger written 21 days ago by apfelbapfel0 • updated 15 days ago by Gordon Smyth36k
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RNAseq analysis: what comes first, filtering or normalization
rnaseq edger R written 25 days ago by apfelbapfel0 • updated 24 days ago by Aaron Lun22k
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100
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Implications of TMM Normalization and Possible Alternatives
normalization edger deg tmm written 28 days ago by rproendo0 • updated 26 days ago by Gordon Smyth36k
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CalcNormFactors in Edge r
edger written 4 weeks ago by phickner20 • updated 4 weeks ago by Gordon Smyth36k
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EstimateDisp and glm
edger written 5 weeks ago by samoura480 • updated 5 weeks ago by Aaron Lun22k
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140
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Count filter for differential expression
limma edger counts written 6 weeks ago by kaur0 • updated 6 weeks ago by Gordon Smyth36k
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101
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edgeR. Known cancer genes are not differentially expressed?
edger tcga written 6 weeks ago by rina0 • updated 6 weeks ago by Aaron Lun22k
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100
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edgeR DE analysis: single group combined factors or GLM with interaction term
edger glm written 7 weeks ago by jspmccain10 • updated 7 weeks ago by Aaron Lun22k
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115
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