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News: ensembl 91 gtfs and fasta twobits have been added to AnnotationHub
annotationhub news ensembl gtf 2bit written 22 months ago by shepherl ♦♦ 1.6k
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ENSEMBL causing issues replicating previous results
topgo R ensembl written 22 months ago by snguyen268 • 0
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biomaRt: drerio_gene_ensembl dataset missing
biomart ripseeker ensembl written 22 months ago by António Miguel de Jesus Domingues • 470 • updated 22 months ago by Mike Smith • 4.0k
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News: Ensembl 91 is out!
biomart news ensembl release ensembl91 written 22 months ago by amonida • 20
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440
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get_gene_transcript_exon_tables.pl extremely slow
ensembl ensembldb written 23 months ago by Ed Siefker • 220 • updated 23 months ago by Johannes Rainer • 1.5k
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News: ensembl 90 ensembldb EnsDb databases have been added to AnnotationHub
annotation annotationhub news ensembl ensemblb written 2.1 years ago by Johannes Rainer • 1.5k
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News: Ensembl 90 has been released
biomart news ensembl release ensembl90 written 2.2 years ago by Thomas Maurel • 770
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677
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1
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biomaRt: list of hosts accessed
biomart ensembl written 2.2 years ago by ashok.ragavendran • 0 • updated 2.2 years ago by Mike Smith • 4.0k
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biomaRt Ensembl ID query returns NA in 'ensembl_gene_id', 'ensembl_transcript_id', etc.
annotation biomart ensembl written 2.3 years ago by yura.grabovska • 20 • updated 2.3 years ago by Mike Smith • 4.0k
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Finding orthologous human/mouse ENSEMBL IDs
annotationdbi ensembl human mouse homologue written 2.4 years ago by Keith Hughitt • 120
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1.7k
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3
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biomaRt - Error in getBM: The query to the BioMart webservice returned an invalid result
biomart error ensembl bioconductor ensembl mart written 2.4 years ago by daniel.carbajo • 0
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News: Ensembl 89 has been released
biomart news ensembl ensemblbiomart ensembl89 written 2.4 years ago by Thomas Maurel • 770
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466
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DESeq2 output with multiple Ensembl Gene Names per row, how to resolve?
rnaseq deseq2 ensembl written 2.4 years ago by Nicholas Owen • 0 • updated 2.4 years ago by Michael Love ♦ 25k
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biomaRt does not return entrezgene id
biomart ensembl bioconductor entrez gene identifiers ensembl mart written 2.5 years ago by daniel.carbajo • 0 • updated 2.5 years ago by Thomas Maurel • 770
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News: Ensembl 88 is out!
biomart news ensembl ensembl mart e!88 written 2.6 years ago by Thomas Maurel • 770
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596
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News: Ensembl 87 is out!
biomart news ensembl ensemble mart ensembl mart written 2.9 years ago by amonida • 20
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592
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News: Ensembl release 86 is out!
biomart news ensembl ensembl release ensembl mart written 3.0 years ago by Thomas Maurel • 770
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Gviz - adding ensembl gene annotation track
gviz ensembl written 3.2 years ago by just • 0
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Using mgeneSim with Ensembl ids
gosemsim ensembl go semantic similarity written 3.2 years ago by saadmurtazakhan • 10 • updated 3.2 years ago by Guangchuang Yu • 1.1k
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News: Ensembl release 85 is out!
biomart news ensembl ensembl release mart release85 written 3.3 years ago by Thomas Maurel • 770
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2.5k
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Ensembl biomaRt connection errors
biomart software error ensembl written 3.3 years ago by genomicsio • 0 • updated 3.3 years ago by Dan Staines • 70
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Ensembl bacteria not accessible from biomaRt
biomart ensembl written 3.4 years ago by arielpaulson • 20 • updated 3.4 years ago by Martin Morgan ♦♦ 23k
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456
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Ensembl version from non-vertebrate biomaRt
biomart ensembl written 3.4 years ago by arielpaulson • 20 • updated 3.4 years ago by Dan Staines • 70
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6 follow
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News: Ensembl release 84 is out!
biomart news ensembl ensembl release mart release84 written 3.6 years ago by Thomas Maurel • 770 • updated 3.5 years ago by arielpaulson • 20
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goseq package: Is the package in sync with the most current Ensembl release?
goseq ensembl written 3.5 years ago by mrodrigues.fernanda • 10 • updated 3.5 years ago by Johannes Rainer • 1.5k
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