0
votes
1
answer
562
views
7 follow
1
answer
more stupid *Ranges questions...
transcription chippeakanno genomicranges written 6.2 years ago by Tim Triche4.2k • updated 6.2 years ago by Michael Lawrence9.8k
9
votes
1
answer
784
views
7 follow
1
answer
looping through a GRangesList object
genomicranges grangeslist written 22 months ago by Simon Anders3.4k • updated 22 months ago by Julian Gehring1.3k
4
votes
4
answers
883
views
6 follow
4
answers
tileGenome for overlapping ranges?
genomicranges written 2.8 years ago by Janet Young730 • updated 2.3 years ago by biocyberman0
0
votes
2
answers
418
views
5 follow
2
answers
good news and bad news
infrastructure cancer iranges genomicranges written 5.3 years ago by Hervé Pagès ♦♦ 13k • updated 5.3 years ago by Steve Lianoglou12k
8
votes
3
answers
3.7k
views
5 follow
3
answers
9
votes
0
answers
2.3k
views
5 follow
0
answers
6
votes
2
answers
149
views
5 follow
2
answers
0
votes
1
answer
370
views
1
answer
Calculate Outer Positions of GappedAlignmentPairs
coverage genomicranges written 4.7 years ago by Dario Strbenac1.4k • updated 4.7 years ago by Michael Lawrence9.8k
0
votes
2
answers
774
views
2
answers
using a gtf file to map reads
genomicranges deseq2 written 4.5 years ago by Sam McInturf300 • updated 4.5 years ago by Michael Lawrence9.8k
9
votes
3
answers
4.4k
views
3
answers
How to properly sort GRanges?
genomicranges granges seqnames sort order written 3.0 years ago by enricoferrero550 • updated 2.6 years ago by yinghua20
3
votes
1
answer
994
views
1
answer
4
votes
1
answer
394
views
1
answer
Select from Overlapping Genomic Ranges based on Score or other Metadata
genomicranges written 21 months ago by IV20 • updated 21 months ago by Michael Lawrence9.8k
8
votes
2
answers
283
views
2
answers
Counting ambiguously mapped reads per feature
rnaseq genomicranges rsamtools genomicalignments bam written 16 months ago by rubi70 • updated 16 months ago by Gordon Smyth32k
3
votes
1
answer
303
views
1
answer
Extract coordinates of overlapping genomic intervals
genomicranges findoverlaps intersect written 15 months ago by rubi70 • updated 15 months ago by Steve Lianoglou12k
0
votes
1
answer
394
views
1
answer
Using GenomicRanges with table data
iranges genomicranges written 4.9 years ago by Tom Oates60 • updated 4.9 years ago by Steve Lianoglou12k
0
votes
1
answer
391
views
1
answer
ReportingTools - trouble incorporating annotations
annotation edger genomicranges written 4.4 years ago by Sam McInturf300 • updated 4.4 years ago by James W. MacDonald45k
0
votes
1
answer
687
views
1
answer
1
vote
1
answer
415
views
1
answer
4
votes
2
answers
2.3k
views
2
answers
Merge multiple genomic intervals if overlapping more than xx percents
genomicranges written 2.5 years ago by samuel collombet100 • updated 2.5 years ago by Hervé Pagès ♦♦ 13k
0
votes
3
answers
1.0k
views
3
answers
3
votes
2
answers
1.8k
views
2
answers
8
votes
2
answers
2.8k
views
2
answers
annotate GRanges with upstream or downstream nearest gene
genomicfeatures genomicranges grange written 22 months ago by tangming200590 • updated 22 months ago by Ou, Jianhong1000
7
votes
1
answer
1.8k
views
1
answer
How do I merge a list of GRanges?
genomicranges written 17 months ago by endrebak8520 • updated 17 months ago by Hervé Pagès ♦♦ 13k
5
votes
2
answers
307
views
2
answers
6
votes
3
answers
246
views
3
answers
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