10
votes
3
answers
6.0k
views
3
answers
How to properly sort GRanges?
genomicranges granges seqnames sort order written 3.6 years ago by enricoferrero560 • updated 3.2 years ago by yinghua30
8
votes
3
answers
4.0k
views
5 follow
3
answers
8
votes
2
answers
4.0k
views
2
answers
annotate GRanges with upstream or downstream nearest gene
genomicfeatures genomicranges grange written 2.5 years ago by tangming200590 • updated 2.5 years ago by Ou, Jianhong1.1k
2
votes
1
answer
4.0k
views
1
answer
how to get genomic coordinates for a list of genes
genomicranges written 3.4 years ago by stephen6630 • updated 3.4 years ago by Sean Davis21k
0
votes
1
answer
3.9k
views
1
answer
rtracklayer importing gtf files
rtracklayer deseq genomicranges written 5.2 years ago by Guest User12k • updated 5.2 years ago by Michael Lawrence10.0k
9
votes
1
answer
3.7k
views
1
answer
How do I merge a list of GRanges?
genomicranges written 2.0 years ago by endrebak8530 • updated 2.0 years ago by Hervé Pagès ♦♦ 13k
4
votes
2
answers
3.2k
views
2
answers
Merge multiple genomic intervals if overlapping more than xx percents
genomicranges written 3.1 years ago by samuel collombet120 • updated 3.1 years ago by Hervé Pagès ♦♦ 13k
4
votes
1
answer
3.0k
views
1
answer
9
votes
0
answers
2.7k
views
5 follow
0
answers
0
votes
2
answers
2.6k
views
2
answers
3
votes
2
answers
2.4k
views
2
answers
1
vote
1
answer
2.4k
views
1
answer
Error trying to install GenomicRanges
rtracklayer iranges genomicranges cummerbund s4vectors written 2.4 years ago by Kevin0 • updated 2.4 years ago by Mike Smith2.7k
6
votes
1
answer
2.2k
views
1
answer
0
votes
1
answer
2.0k
views
1
answer
GRanges DitancetoNearest query
transcription genomicranges written 5.8 years ago by d r150 • updated 5.8 years ago by Steve Lianoglou12k
4
votes
1
answer
1.9k
views
1
answer
mapCoords for converting genomic coordinates to cDNA coordinates?
genomicranges written 3.7 years ago by amias10 • updated 3.7 years ago by Valerie Obenchain ♦♦ 6.5k
6
votes
0
answers
1.8k
views
0
answers
2
votes
2
answers
1.6k
views
2
answers
coverage over specific GenomicRanges
genomicranges written 3.0 years ago by Jake60 • updated 3.0 years ago by Hervé Pagès ♦♦ 13k
3
votes
1
answer
1.6k
views
1
answer
resize (shrink/expand) GenomicRanges
iranges genomicranges written 2.3 years ago by aush10 • updated 2.3 years ago by Hervé Pagès ♦♦ 13k
6
votes
1
answer
1.6k
views
1
answer
Intergenic coordinates with Genomic Feaures
iranges genomicfeatures genomicranges written 3.2 years ago by cookie20 • updated 3.2 years ago by Mike Smith2.7k
4
votes
1
answer
1.5k
views
1
answer
extracting distance from Hits object
iranges genomicranges written 3.4 years ago by liz.ingsimmons120 • updated 3.4 years ago by Hervé Pagès ♦♦ 13k
0
votes
1
answer
1.5k
views
1
answer
5
votes
2
answers
1.4k
views
2
answers
1
vote
1
answer
1.4k
views
1
answer
bedtools like subtract in genomic ranges?
genomicranges written 3.0 years ago by Jake60 • updated 3.0 years ago by Martin Morgan ♦♦ 21k
5
votes
2
answers
1.3k
views
2
answers
0
votes
0
answers
1.3k
views
0
answers
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