9
votes
0
answers
2.8k
views
5 follow
0
answers
6
votes
0
answers
1.8k
views
0
answers
9
votes
1
answer
1.2k
views
7 follow
1
answer
looping through a GRangesList object
genomicranges grangeslist written 2.5 years ago by Simon Anders3.5k • updated 2.5 years ago by Julian Gehring1.3k
4
votes
4
answers
1.1k
views
6 follow
4
answers
tileGenome for overlapping ranges?
genomicranges written 3.4 years ago by Janet Young730 • updated 2.9 years ago by biocyberman0
5
votes
2
answers
1.4k
views
2
answers
8
votes
3
answers
4.0k
views
5 follow
3
answers
8
votes
2
answers
4.1k
views
2
answers
annotate GRanges with upstream or downstream nearest gene
genomicfeatures genomicranges grange written 2.5 years ago by tangming200590 • updated 2.5 years ago by Ou, Jianhong1.1k
9
votes
1
answer
3.9k
views
1
answer
How do I merge a list of GRanges?
genomicranges written 2.1 years ago by endrebak8530 • updated 2.1 years ago by Hervé Pagès ♦♦ 13k
6
votes
2
answers
316
views
5 follow
2
answers
3
votes
1
answer
47
views
1
answer
1
vote
0
answers
1.0k
views
0
answers
1
vote
0
answers
598
views
0
answers
4
votes
1
answer
2.0k
views
1
answer
mapCoords for converting genomic coordinates to cDNA coordinates?
genomicranges written 3.7 years ago by amias10 • updated 3.7 years ago by Valerie Obenchain ♦♦ 6.5k
4
votes
1
answer
915
views
1
answer
Combine two GRanges to a single GRangesList
genomicranges granges grangeslist written 3.6 years ago by Sean Davis21k • updated 3.6 years ago by Martin Morgan ♦♦ 22k
3
votes
1
answer
1.1k
views
1
answer
4
votes
1
answer
1.6k
views
1
answer
extracting distance from Hits object
iranges genomicranges written 3.5 years ago by liz.ingsimmons120 • updated 3.5 years ago by Hervé Pagès ♦♦ 13k
2
votes
1
answer
4.0k
views
1
answer
how to get genomic coordinates for a list of genes
genomicranges written 3.5 years ago by stephen6630 • updated 3.5 years ago by Sean Davis21k
1
vote
1
answer
499
views
1
answer
removing reads from coverage() calculation.
genomicranges rsamtools bam written 3.4 years ago by gen30 • updated 3.4 years ago by Martin Morgan ♦♦ 22k
2
votes
1
answer
663
views
1
answer
Change the start of GenomicRanges list
genomicranges written 3.4 years ago by Jake60 • updated 3.4 years ago by Hervé Pagès ♦♦ 13k
1
vote
1
answer
1.4k
views
1
answer
bedtools like subtract in genomic ranges?
genomicranges written 3.0 years ago by Jake60 • updated 3.0 years ago by Martin Morgan ♦♦ 22k
1
vote
1
answer
901
views
1
answer
Does coverage() split exon spanning RNA-seq reads?
coverage genomicranges genomicalignments written 3.0 years ago by Jake60 • updated 3.0 years ago by Martin Morgan ♦♦ 22k
1
vote
2
answers
981
views
2
answers
GenomicRanges bug in follow?
genomicranges written 2.8 years ago by Janet Young730
4
votes
1
answer
3.1k
views
1
answer
3
votes
1
answer
1.7k
views
1
answer
resize (shrink/expand) GenomicRanges
iranges genomicranges written 2.4 years ago by aush10 • updated 2.4 years ago by Hervé Pagès ♦♦ 13k
4
votes
1
answer
536
views
1
answer
Select from Overlapping Genomic Ranges based on Score or other Metadata
genomicranges written 2.4 years ago by IV20 • updated 2.4 years ago by Michael Lawrence10k
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