Showing: genomicrangesreset
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looping through a GRangesList object
genomicranges grangeslist written 3.4 years ago by Simon Anders3.5k • updated 3.4 years ago by Julian Gehring1.3k
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resize (shrink/expand) GenomicRanges
iranges genomicranges written 3.3 years ago by aush40 • updated 3.3 years ago by Hervé Pagès ♦♦ 14k
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tileGenome for overlapping ranges?
genomicranges written 4.4 years ago by Janet Young730 • updated 3.8 years ago by biocyberman0
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annotate GRanges with upstream or downstream nearest gene
genomicfeatures genomicranges grange written 3.5 years ago by tangming2005140 • updated 3.5 years ago by Ou, Jianhong1.1k
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How do I merge a list of GRanges?
genomicranges written 3.0 years ago by endrebak8530 • updated 3.0 years ago by Hervé Pagès ♦♦ 14k
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mapCoords for converting genomic coordinates to cDNA coordinates?
genomicranges written 4.6 years ago by amias10 • updated 4.6 years ago by Valerie Obenchain6.7k
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Combine two GRanges to a single GRangesList
genomicranges granges grangeslist written 4.5 years ago by Sean Davis21k • updated 4.5 years ago by Martin Morgan ♦♦ 23k
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extracting distance from Hits object
iranges genomicranges written 4.4 years ago by liz.ingsimmons140 • updated 4.4 years ago by Hervé Pagès ♦♦ 14k
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how to get genomic coordinates for a list of genes
genomicranges written 4.4 years ago by stephen6630 • updated 4.4 years ago by Sean Davis21k
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removing reads from coverage() calculation.
genomicranges rsamtools bam written 4.3 years ago by gen30 • updated 4.3 years ago by Martin Morgan ♦♦ 23k
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Change the start of GenomicRanges list
genomicranges written 4.3 years ago by Jake60 • updated 4.3 years ago by Hervé Pagès ♦♦ 14k
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bedtools like subtract in genomic ranges?
genomicranges written 4.0 years ago by Jake60 • updated 4.0 years ago by Martin Morgan ♦♦ 23k
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Does coverage() split exon spanning RNA-seq reads?
coverage genomicranges genomicalignments written 3.9 years ago by Jake60 • updated 3.9 years ago by Martin Morgan ♦♦ 23k
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GenomicRanges bug in follow?
genomicranges written 3.7 years ago by Janet Young730
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