geoquery Posts

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How do I creat an expressionset if there is no GDS listed on the GEO database?

microarray limma geoquery written 7 months ago by pgurkirat • 0 • updated 7 months ago by James W. MacDonald ♦ 52k

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GEOquery: HTTP error 403

geoquery geo http error 403 written 7 months ago by andy_shaps • 10

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Install a custom CDF file

annotation biobase geoquery rma makecdf written 5 months ago by Seymoo • 0 • updated 5 months ago by James W. MacDonald ♦ 52k

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Downloading a private GEO with GEOquery

geoquery written 8 weeks ago by Lluís Revilla Sancho • 530 • updated 8 weeks ago by Sean Davis ♦ 21k

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Error object and replacement value dimnames differ, when changing column names of assayData of ExpressionSet (although dimension is same)

geoquery oligo expressionset written 6 weeks ago by salamandra • 0 • updated 6 weeks ago by James W. MacDonald ♦ 52k

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When applying rma to featureset get error: 'package' must be of length 1

biobase geoquery oligo written 5 weeks ago by salamandra • 0 • updated 5 weeks ago by James W. MacDonald ♦ 52k

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GEOquery:Get error sampleNames

geoquery written 12 months ago by ustcxyf • 10 • updated 11 months ago by Bioconductor Community ♦♦ 0

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geGeo error - Error in .subset2(x, i) : subscript out of bounds

geoquery written 12 months ago by yurigorelik • 10 • updated 12 months ago by James W. MacDonald ♦ 52k

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GEOquery: series matrix not parsing correctly

geoquery geo written 7 months ago by andy_shaps • 10 • updated 7 months ago by James W. MacDonald ♦ 52k

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GEOquery and Feature data

geoquery featurenames written 27 days ago by ekl • 0 • updated 27 days ago by Sean Davis ♦ 21k