9
votes
3
answers
4.4k
views
3
answers
How to properly sort GRanges?
genomicranges granges seqnames sort order written 3.0 years ago by enricoferrero550 • updated 2.6 years ago by yinghua20
9
votes
3
answers
4.0k
views
6 follow
3
answers
DESeq2: add annotations (from data frame) to DESeqDataSet
annotation deseq2 granges written 3.1 years ago by Darya Vanichkina90 • updated 22 months ago by bioprog0
22
votes
2
answers
3.2k
views
5 follow
2
answers
2
votes
2
answers
2.2k
views
2
answers
0
votes
3
answers
1.9k
views
3
answers
4
votes
1
answer
1.8k
views
1
answer
3
votes
2
answers
1.8k
views
2
answers
3
votes
2
answers
1.6k
views
2
answers
2
votes
2
answers
1.6k
views
2
answers
0
votes
2
answers
1.5k
views
2
answers
28
votes
4
answers
1.4k
views
10 follow
4
answers
5
votes
2
answers
1.4k
views
2
answers
6
votes
1
answer
1.3k
views
1
answer
9
votes
1
answer
1.2k
views
1
answer
manipulate bedpe format files
rtracklayer granges bedpe structural variants written 21 months ago by tangming200590 • updated 21 months ago by Aaron Lun17k
3
votes
1
answer
1.1k
views
1
answer
10
votes
3
answers
978
views
6 follow
3
answers
Transitive overlaps of GRanges object
granges findoverlaps written 2.8 years ago by Stefanie Tauber40 • updated 2.7 years ago by Hervé Pagès ♦♦ 13k
8
votes
2
answers
976
views
2
answers
import wig to coverage
rtracklayer granges import.wig written 2.8 years ago by liz.ingsimmons120 • updated 2.8 years ago by Hervé Pagès ♦♦ 13k
2
votes
1
answer
877
views
1
answer
Shrink or Expand RLE
coverage iranges granges rle written 2.6 years ago by gen30 • updated 2.6 years ago by Martin Morgan ♦♦ 20k
2
votes
1
answer
876
views
1
answer
getSeq with GRanges object error: function not found
bsgenome biostrings granges written 3.2 years ago by Miskey, Csaba20 • updated 3.2 years ago by Martin Morgan ♦♦ 20k
2
votes
3
answers
857
views
3
answers
Extract three types of intergenic regions
annotation iranges granges views written 2.1 years ago by vinod.acear20 • updated 2.1 years ago by Thomas Girke1.6k
2
votes
2
answers
836
views
2
answers
ggbio circular plot
snp ggbio granges written 23 months ago by Marcin Grzybowski0 • updated 23 months ago by Michael Lawrence9.8k
1
vote
2
answers
820
views
2
answers
about appending GRANGES
granges written 3.0 years ago by Bogdan470
0
votes
1
answer
701
views
1
answer
Help with toGRanges
chippeakanno granges written 19 months ago by mhartman30 • updated 19 months ago by Dario Strbenac1.4k
0
votes
0
answers
689
views
0
answers
2
votes
1
answer
668
views
1
answer
Editing of GAlignments
rsamtools granges bioconductor written 2.7 years ago by gen30 • updated 2.7 years ago by Martin Morgan ♦♦ 20k
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