Showing: grangesreset
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DESeq2: add annotations (from data frame) to DESeqDataSet
annotation deseq2 granges written 5.1 years ago by Darya Vanichkina110 • updated 3.9 years ago by bioprog0
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Transitive overlaps of GRanges object
granges findoverlaps written 4.8 years ago by Stefanie Tauber40 • updated 4.8 years ago by Hervé Pagès ♦♦ 14k
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How to properly sort GRanges?
genomicranges granges seqnames sort order written 5.1 years ago by enricoferrero570 • updated 4.7 years ago by yinghua30
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Compute average score across multiple bed files
granges R chip-seq bed files written 16 months ago by jinseok0 • updated 16 months ago by spotifywebplayer0
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the closest gene to a breakpoint
granges plyranges written 15 months ago by Bogdan580 • updated 15 months ago by Gordon Smyth39k
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Granges and reference genome
granges written 5.2 years ago by Asma rabe290 • updated 5.2 years ago by Sean Davis21k
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Calling coverage on GRanges object yields small negative values
coverage granges written 4.7 years ago by Anya10 • updated 4.7 years ago by Hervé Pagès ♦♦ 14k
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How to remove out of bound rows from granges
granges grangeslist written 4.2 years ago by vinod.acear40 • updated 4 months ago by balwierz40
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Rsamtools memory leak
iranges rsamtools granges bam scanbam written 4.1 years ago by mhills10
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manipulate bedpe format files
rtracklayer granges bedpe structural variants written 3.8 years ago by tangming2005150 • updated 3.8 years ago by Aaron Lun25k
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Overlap the snps
iranges granges overlap snps written 5.2 years ago by anastasiya-terskih10 • updated 5.2 years ago by Michael Lawrence11k
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