1
vote
1
answer
375
views
1
answer
0
votes
1
answer
527
views
1
answer
topGO - treating up- and down-regulated genes separately
topgo pathway analysis gsea written 19 months ago by predeus0 • updated 19 months ago by Lluís Revilla Sancho400
1
vote
2
answers
875
views
2
answers
how to perform pre ranked GSEA in R?
microarray statistics R gsea written 3.6 years ago by Nemo80 • updated 19 months ago by predeus0
2
votes
1
answer
483
views
1
answer
0
votes
1
answer
573
views
1
answer
Statistic for GSA
gsea gsa concept written 20 months ago by Lluís Revilla Sancho400 • updated 20 months ago by Pekka Kohonen190
2
votes
1
answer
438
views
1
answer
Direction aware fgsea test
gsea fgsea written 21 months ago by rubi90 • updated 21 months ago by assaron150
1
vote
4
answers
545
views
4
answers
GO slim data for GAGE GSEA analysis
go gage gsea written 2.2 years ago by rubi90 • updated 23 months ago by Guangchuang Yu1.0k
0
votes
1
answer
538
views
1
answer
0
votes
1
answer
530
views
1
answer
ClusterProfiler can't load gmt file
clusterprofiler gsea gmt written 2.2 years ago by sarah.blackstone77340 • updated 2.2 years ago by Guangchuang Yu1.0k
1
vote
1
answer
2.1k
views
1
answer
GSEA preranked analysis downstream of DEseq2
rnaseq deseq2 gsea written 2.2 years ago by EJ0 • updated 2.2 years ago by Michael Love19k
9
votes
3
answers
1.8k
views
3
answers
GSEA-like enrichment score calculation
gseabase gsea enrichment analysis written 2.3 years ago by Matthias Z.20 • updated 2.3 years ago by Gordon Smyth35k
0
votes
4
answers
551
views
4
answers
Gage and setp argument
gage gsea written 2.4 years ago by peter.chernek0
1
vote
0
answers
501
views
0
answers
0
votes
3
answers
655
views
3
answers
gene set (enrichment) analysis
gsea gsa written 2.6 years ago by Bogdan520 • updated 2.6 years ago by Axel Klenk920
2
votes
2
answers
536
views
2
answers
1
vote
1
answer
408
views
1
answer
giving weight to DEG from limma output
limma gsea written 2.6 years ago by Shamim Sarhadi20 • updated 2.6 years ago by Aaron Lun21k
2
votes
2
answers
1.2k
views
6 follow
2
answers
Arguments for camera (gene set analysis)
camera gsea written 2.6 years ago by claire.n.levy10 • updated 2.6 years ago by Steve Lianoglou12k
13
votes
2
answers
1.9k
views
2
answers
Best method/package for Gene Set Enrichment Analysis in microarrays?
gostats topgo goseq gsea gega written 2.9 years ago by jacorvar40 • updated 2.9 years ago by Robert Castelo2.2k
1
vote
0
answers
626
views
0
answers
0
votes
0
answers
550
views
0
answers
5
votes
1
answer
983
views
1
answer
0
votes
1
answer
979
views
1
answer
Gene set enrichment analysis with gage package returning NaN p-values
rnaseq gage gsea written 3.5 years ago by Tom0 • updated 3.5 years ago by Luo Weijun1.4k
8
votes
2
answers
2.5k
views
2
answers
Gene set enrichment analysis
topgo gseabase gostat gsea written 3.9 years ago by kaushal Raj Chaudhary10 • updated 3.9 years ago by Levi Waldron730
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