Showing: gseareset
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two-color microarray - Gene Set Enrichment Analysis
gsea twocolor microarray written 21 months ago by Sanches0 • updated 21 months ago by Gordon Smyth37k
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Intepretation of Z scores for gene set enrichment analysis in MAST
gsea scrna mast written 22 months ago by siajunren0 • updated 22 months ago by Andrew_McDavid190
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687
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FGSEA only runs with <1000 permutations
gsea fgsea written 22 months ago by shawn.w.foley0 • updated 22 months ago by assaron150
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487
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GSEA threshold question
clusterprofiler R gsea reactomepa written 23 months ago by bhgyu30
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659
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GAGE or GSEABase using expression data and pathway.gmt file for mouse
pathways gage R gsea written 2.1 years ago by snishtala030 • updated 2.1 years ago by Luo Weijun1.4k
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467
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730
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topGO - treating up- and down-regulated genes separately
topgo pathway analysis gsea written 2.2 years ago by predeus0 • updated 2.2 years ago by Lluís Revilla Sancho470
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2
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998
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2
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how to perform pre ranked GSEA in R?
microarray statistics R gsea written 4.2 years ago by Nemo80 • updated 2.2 years ago by predeus0
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597
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Statistic for GSA
gsea gsa concept written 2.3 years ago by Lluís Revilla Sancho470 • updated 2.3 years ago by Pekka Kohonen190
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549
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Direction aware fgsea test
gsea fgsea written 2.4 years ago by rubi90 • updated 2.4 years ago by assaron150
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4
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667
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4
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GO slim data for GAGE GSEA analysis
go gage gsea written 2.8 years ago by rubi90 • updated 2.5 years ago by Guangchuang Yu1.1k
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649
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660
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ClusterProfiler can't load gmt file
clusterprofiler gsea gmt written 2.8 years ago by sarah.blackstone77340 • updated 2.8 years ago by Guangchuang Yu1.1k
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GSEA preranked analysis downstream of DEseq2
rnaseq deseq2 gsea written 2.8 years ago by EJ0 • updated 2.8 years ago by Michael Love23k
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3
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2.4k
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3
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GSEA-like enrichment score calculation
gseabase gsea enrichment analysis written 2.9 years ago by Matthias Z.20 • updated 2.9 years ago by Gordon Smyth37k
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4
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676
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4
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Gage and setp argument
gage gsea written 3.0 years ago by peter.chernek0
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590
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3
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771
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gene set (enrichment) analysis
gsea gsa written 3.2 years ago by Bogdan550 • updated 3.2 years ago by Axel Klenk920
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621
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2
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462
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giving weight to DEG from limma output
limma gsea written 3.2 years ago by Shamim Sarhadi20 • updated 3.2 years ago by Aaron Lun23k
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6 follow
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Arguments for camera (gene set analysis)
camera gsea written 3.2 years ago by claire.n.levy10 • updated 3.2 years ago by Steve Lianoglou12k
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