1
vote
2
answers
101
views
2
answers
GSVA for single sample
gsva gsea ssgsea written 14 days ago by jaison750
0
votes
1
answer
117
views
1
answer
merging gseaResult objects
clusterprofiler gsea written 22 days ago by robmarin0 • updated 22 days ago by Guangchuang Yu890
1
vote
0
answers
130
views
0
answers
0
votes
0
answers
90
views
0
answers
0
votes
0
answers
160
views
0
answers
2
votes
1
answer
313
views
1
answer
2
votes
1
answer
198
views
1
answer
GSEA using clusterprofileR
clusterprofiler gsea written 4 months ago by sup23010 • updated 4 months ago by assaron140
0
votes
0
answers
106
views
0
answers
0
votes
1
answer
192
views
1
answer
1
vote
1
answer
283
views
1
answer
two-color microarray - Gene Set Enrichment Analysis
gsea twocolor microarray written 5 months ago by Sanches0 • updated 5 months ago by Gordon Smyth32k
2
votes
0
answers
556
views
0
answers
0
votes
1
answer
657
views
1
answer
Intepretation of Z scores for gene set enrichment analysis in MAST
gsea scrna mast written 6 months ago by siajunren0 • updated 6 months ago by Andrew_McDavid100
1
vote
1
answer
401
views
1
answer
FGSEA only runs with <1000 permutations
gsea fgsea written 7 months ago by shawn.w.foley0 • updated 7 months ago by assaron140
0
votes
0
answers
252
views
0
answers
0
votes
1
answer
302
views
1
answer
GAGE or GSEABase using expression data and pathway.gmt file for mouse
pathways gage R gsea written 9 months ago by snishtala030 • updated 9 months ago by Luo Weijun1.4k
1
vote
1
answer
253
views
1
answer
0
votes
1
answer
318
views
1
answer
topGO - treating up- and down-regulated genes separately
topgo pathway analysis gsea written 11 months ago by predeus0 • updated 11 months ago by Lluís R310
0
votes
1
answer
383
views
1
answer
Statistic for GSA
gsea gsa concept written 12 months ago by Lluís R310 • updated 12 months ago by Pekka Kohonen190
2
votes
1
answer
309
views
1
answer
Direction aware fgsea test
gsea fgsea written 13 months ago by rubi80 • updated 13 months ago by assaron140
2
votes
1
answer
351
views
1
answer
0
votes
1
answer
379
views
1
answer
1
vote
4
answers
424
views
4
answers
GO slim data for GAGE GSEA analysis
go gage gsea written 18 months ago by rubi80 • updated 15 months ago by Guangchuang Yu890
0
votes
1
answer
349
views
1
answer
ClusterProfiler can't load gmt file
clusterprofiler gsea gmt written 18 months ago by sarah.blackstone77340 • updated 18 months ago by Guangchuang Yu890
1
vote
1
answer
1.2k
views
1
answer
GSEA preranked analysis downstream of DEseq2
rnaseq deseq2 gsea written 18 months ago by EJ0 • updated 18 months ago by Michael Love16k
9
votes
3
answers
1.1k
views
3
answers
GSEA-like enrichment score calculation
gseabase gsea enrichment analysis written 20 months ago by Matthias Z.20 • updated 20 months ago by Gordon Smyth32k
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