0
votes
0
answers
97
views
0
answers
2
votes
1
answer
215
views
1
answer
2
votes
1
answer
124
views
1
answer
GSEA using clusterprofileR
clusterprofiler gsea written 5 weeks ago by sup23010 • updated 5 weeks ago by assaron130
0
votes
0
answers
63
views
0
answers
0
votes
1
answer
153
views
1
answer
1
vote
1
answer
239
views
1
answer
two-color microarray - Gene Set Enrichment Analysis
gsea twocolor microarray written 11 weeks ago by Sanches0 • updated 11 weeks ago by Gordon Smyth32k
2
votes
0
answers
515
views
0
answers
0
votes
1
answer
579
views
1
answer
Intepretation of Z scores for gene set enrichment analysis in MAST
gsea scrna mast written 3 months ago by siajunren0 • updated 3 months ago by Andrew_McDavid80
1
vote
1
answer
353
views
1
answer
FGSEA only runs with <1000 permutations
gsea fgsea written 4 months ago by shawn.w.foley0 • updated 4 months ago by assaron130
0
votes
0
answers
216
views
0
answers
0
votes
1
answer
240
views
1
answer
GAGE or GSEABase using expression data and pathway.gmt file for mouse
pathways gage R gsea written 6 months ago by snishtala030 • updated 6 months ago by Luo Weijun1.4k
1
vote
1
answer
216
views
1
answer
0
votes
1
answer
253
views
1
answer
topGO - treating up- and down-regulated genes separately
topgo pathway analysis gsea written 8 months ago by predeus0 • updated 8 months ago by Lluís R300
0
votes
1
answer
305
views
1
answer
Statistic for GSA
gsea gsa concept written 9 months ago by Lluís R300 • updated 9 months ago by Pekka Kohonen190
2
votes
1
answer
250
views
1
answer
Direction aware fgsea test
gsea fgsea written 10 months ago by rubi70 • updated 10 months ago by assaron130
2
votes
1
answer
309
views
1
answer
0
votes
1
answer
325
views
1
answer
1
vote
4
answers
368
views
4
answers
GO slim data for GAGE GSEA analysis
go gage gsea written 15 months ago by rubi70 • updated 12 months ago by Guangchuang Yu800
0
votes
1
answer
302
views
1
answer
ClusterProfiler can't load gmt file
clusterprofiler gsea gmt written 15 months ago by sarah.blackstone77340 • updated 15 months ago by Guangchuang Yu800
1
vote
1
answer
949
views
1
answer
GSEA preranked analysis downstream of DEseq2
rnaseq deseq2 gsea written 15 months ago by EJ0 • updated 15 months ago by Michael Love15k
9
votes
3
answers
934
views
3
answers
GSEA-like enrichment score calculation
gseabase gsea enrichment analysis written 17 months ago by Matthias Z.20 • updated 17 months ago by Gordon Smyth32k
0
votes
4
answers
393
views
4
answers
Gage and setp argument
gage gsea written 18 months ago by peter.chernek0
1
vote
0
answers
337
views
0
answers
0
votes
3
answers
428
views
3
answers
gene set (enrichment) analysis
gsea gsa written 20 months ago by Bogdan470 • updated 20 months ago by Axel Klenk820
2
votes
2
answers
355
views
2
answers
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