0
votes
1
answer
76
views
1
answer
gene set enrichment analysis
gsea gsa written 11 days ago by Bogdan520 • updated 11 days ago by Gordon Smyth35k
0
votes
0
answers
61
views
0
answers
2
votes
1
answer
183
views
1
answer
GSEA for RNA-seq analysis
limma gsea ttest preranked gsea written 9 weeks ago by imalumberjack0 • updated 9 weeks ago by Gordon Smyth35k
0
votes
0
answers
82
views
0
answers
0
votes
0
answers
98
views
0
answers
0
votes
2
answers
112
views
2
answers
Issues in generating workable rank file for GSEA
gseabase deseq2 gsea pre-ranked gsea written 4 months ago by csijst0 • updated 4 months ago by Michael Love19k
1
vote
0
answers
167
views
0
answers
1
vote
1
answer
144
views
1
answer
Where is it possible to find gene sets in rdata format for GSEA ?
rattus norvegicus gsea written 5 months ago by Aurora10 • updated 5 months ago by Gordon Smyth35k
2
votes
1
answer
341
views
1
answer
Clusterprofiler - MSigDB gene set analysis - Updated
clusterprofiler gsea msigdb written 7 months ago by thomasjenner3330 • updated 7 months ago by Guangchuang Yu1.0k
1
vote
2
answers
220
views
2
answers
GSVA for single sample
gsva gsea ssgsea written 8 months ago by jaison750
0
votes
1
answer
248
views
1
answer
merging gseaResult objects
clusterprofiler gsea written 8 months ago by robmarin0 • updated 8 months ago by Guangchuang Yu1.0k
1
vote
0
answers
257
views
0
answers
0
votes
0
answers
215
views
0
answers
0
votes
0
answers
325
views
0
answers
2
votes
1
answer
753
views
1
answer
2
votes
1
answer
355
views
1
answer
GSEA using clusterprofileR
clusterprofiler gsea written 12 months ago by sup23010 • updated 12 months ago by assaron150
0
votes
0
answers
217
views
0
answers
0
votes
1
answer
297
views
1
answer
1
vote
1
answer
360
views
1
answer
two-color microarray - Gene Set Enrichment Analysis
gsea twocolor microarray written 13 months ago by Sanches0 • updated 13 months ago by Gordon Smyth35k
2
votes
0
answers
700
views
0
answers
2
votes
1
answer
971
views
1
answer
Intepretation of Z scores for gene set enrichment analysis in MAST
gsea scrna mast written 14 months ago by siajunren0 • updated 14 months ago by Andrew_McDavid150
1
vote
1
answer
555
views
1
answer
FGSEA only runs with <1000 permutations
gsea fgsea written 14 months ago by shawn.w.foley0 • updated 14 months ago by assaron150
0
votes
0
answers
370
views
0
answers
GSEA threshold question
clusterprofiler R gsea reactomepa written 16 months ago by bhgyu30
0
votes
1
answer
500
views
1
answer
GAGE or GSEABase using expression data and pathway.gmt file for mouse
pathways gage R gsea written 17 months ago by snishtala030 • updated 17 months ago by Luo Weijun1.4k
1
vote
1
answer
374
views
1
answer
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