Showing: gseareset
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6 follow
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Arguments for camera (gene set analysis)
camera gsea written 3.6 years ago by claire.n.levy10 • updated 3.6 years ago by Steve Lianoglou12k
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gene set (enrichment) analysis
gsea gsa written 3.6 years ago by Bogdan580 • updated 3.6 years ago by Axel Klenk940
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GSEA-like enrichment score calculation
gseabase gsea enrichment analysis written 3.3 years ago by Matthias Z.20 • updated 3.3 years ago by Gordon Smyth38k
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614
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GSEA using clusterprofileR
clusterprofiler gsea written 24 months ago by sup23030 • updated 24 months ago by assaron150
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1
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277
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Are singscore scores comparable between gene sets?
gsva gsea geneset subtypes singscore written 7 months ago by Pietro20 • updated 7 months ago by Robert Castelo2.3k
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Gene set enrichment analysis
topgo gseabase gostat gsea written 4.9 years ago by kaushal Raj Chaudhary10 • updated 4.9 years ago by Levi Waldron950
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Best method/package for Gene Set Enrichment Analysis in microarrays?
gostats topgo goseq gsea gega written 3.9 years ago by jacorvar40 • updated 3.9 years ago by Robert Castelo2.3k
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GSEA for RNA-seq analysis
limma gsea ttest preranked gsea written 14 months ago by imalumberjack0 • updated 14 months ago by Gordon Smyth38k
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377
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gseaplot vertical line
clusterprofiler gsea written 11 months ago by abelsousa0 • updated 9 months ago by Bioconductor Community ♦♦ 0
2
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245
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How to get t-statistic values using edgeR?
edger R gsea fgsea t-statistic written 5 months ago by Biologist70 • updated 5 months ago by Gordon Smyth38k
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how to perform pre ranked GSEA in R?
microarray statistics R gsea written 4.6 years ago by Nemo80 • updated 2.6 years ago by predeus0
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4
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GO slim data for GAGE GSEA analysis
go gage gsea written 3.1 years ago by rubi90 • updated 2.9 years ago by Guangchuang Yu1.1k
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0
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Statistic for GSA
gsea gsa concept written 2.7 years ago by Lluís Revilla Sancho510 • updated 2.7 years ago by Pekka Kohonen190
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825
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topGO - treating up- and down-regulated genes separately
topgo pathway analysis gsea written 2.6 years ago by predeus0 • updated 2.6 years ago by Lluís Revilla Sancho510
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473
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two-color microarray - Gene Set Enrichment Analysis
gsea twocolor microarray written 2.1 years ago by Sanches0 • updated 2.1 years ago by Gordon Smyth38k
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Where is it possible to find gene sets in rdata format for GSEA ?
rattus norvegicus gsea written 17 months ago by Aurora10 • updated 17 months ago by Gordon Smyth38k
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266
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gene set enrichment analysis
gsea gsa written 12 months ago by Bogdan580 • updated 12 months ago by Gordon Smyth38k
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1
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238
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GSEA using TFs as the gene set
gsea transcription factor binding site enrichment analysis written 11 months ago by tkapell0 • updated 11 months ago by lhuang730
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686
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1
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DESeq2 log2FC shrink before GSEA or not?
rnaseq deseq2 gsea gene espression written 7 months ago by bmreilly0 • updated 7 months ago by Michael Love25k
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ClusterProfiler GSEA with geneList
clusterprofiler gsea genelist written 3 months ago by lucap0 • updated 3 months ago by Ludwig Geistlinger50
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Gene set enrichment analysis with gage package returning NaN p-values
rnaseq gage gsea written 4.5 years ago by Tom0 • updated 4.5 years ago by Luo Weijun1.5k
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