Showing: gseareset
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How to get t-statistic values using edgeR?
edger R gsea fgsea t-statistic written 19 days ago by Biologist70 • updated 19 days ago by Gordon Smyth37k
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140
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Are singscore scores comparable between gene sets?
gsva gsea geneset subtypes singscore written 10 weeks ago by Pietro20 • updated 10 weeks ago by Robert Castelo2.3k
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DESeq2 log2FC shrink before GSEA or not?
rnaseq deseq2 gsea gene espression written 12 weeks ago by bmreilly0 • updated 12 weeks ago by Michael Love23k
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118
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Enrichment Analysis with only GeneSymbols
R rna-seq gsea scrna-seq written 12 weeks ago by hamza_karakurt30 • updated 12 weeks ago by Peter Langfelder1.9k
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263
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gseaplot vertical line
clusterprofiler gsea written 6 months ago by abelsousa0 • updated 4 months ago by Bioconductor Community ♦♦ 0
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184
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GSEA using TFs as the gene set
gsea transcription factor binding site enrichment analysis written 6 months ago by tkapell0 • updated 6 months ago by lhuang730
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189
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gene set enrichment analysis
gsea gsa written 7 months ago by Bogdan550 • updated 7 months ago by Gordon Smyth37k
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193
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343
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GSEA for RNA-seq analysis
limma gsea ttest preranked gsea written 9 months ago by imalumberjack0 • updated 9 months ago by Gordon Smyth37k
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275
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281
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Issues in generating workable rank file for GSEA
gseabase deseq2 gsea pre-ranked gsea written 11 months ago by csijst0 • updated 11 months ago by Michael Love23k
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350
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273
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Where is it possible to find gene sets in rdata format for GSEA ?
rattus norvegicus gsea written 13 months ago by Aurora10 • updated 13 months ago by Gordon Smyth37k
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605
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Clusterprofiler - MSigDB gene set analysis - Updated
clusterprofiler gsea msigdb written 14 months ago by thomasjenner3330 • updated 14 months ago by Guangchuang Yu1.1k
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348
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GSVA for single sample
gsva gsea ssgsea written 15 months ago by jaison7510
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364
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merging gseaResult objects
clusterprofiler gsea written 16 months ago by robmarin0 • updated 15 months ago by Guangchuang Yu1.1k
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363
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GSEA using clusterprofileR
clusterprofiler gsea written 19 months ago by sup23030 • updated 19 months ago by assaron150
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