Showing: keggreset
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Packages for GO and KEGG analysis on RNAseq data
go goseq gage kegg written 5.2 years ago by Merienne Nicolas120 • updated 5.1 years ago by Gordon Smyth39k
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gage pathways enrichment analysis
pathways gage kegg written 5.0 years ago by francesca.defilippis60 • updated 5.0 years ago by Luo Weijun1.5k
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Pathview None of the genes or compounds mapped to the pathway
pathways pathview kegg empty map written 3.9 years ago by Dani0 • updated 3.9 years ago by Luo Weijun1.5k
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Gene Symbol with Pathview
visualization pathview bioconductor kegg written 4.1 years ago by abhinavbn0 • updated 4.1 years ago by Luo Weijun1.5k
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Incomplete gene IDs in KEGG pathway testing
gostats kegg written 5.0 years ago by willmacnair0 • updated 5.0 years ago by James W. MacDonald51k
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How to use topGO and KEGG with de-novo species
limma topgo edger kegg kegga written 2.2 years ago by mictadlo0 • updated 2.2 years ago by Gordon Smyth39k
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Pathview pathview kegg.native=TRUE throws error in img
rnaseq pathview error bioconductor kegg written 2.7 years ago by guillermo.marco30 • updated 2.1 years ago by map208520
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retrieve kegg pathway abundances from gage analysis
pathways gage kegg written 4.7 years ago by francesca.defilippis60 • updated 4.7 years ago by Luo Weijun1.5k
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GeneAnswer for bacteria metagenomes
geneanswers kegg metagenome written 5.0 years ago by francesca.defilippis60 • updated 3.4 years ago by Guangchuang Yu1.1k
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Using pathview with uncommon species leads to Errors
rnaseq pathview kegg data visualization written 3.3 years ago by rafre0 • updated 3.3 years ago by Luo Weijun1.5k
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Analysis of pathways using edgeR
rnaseq edger kegg differential expression written 20 months ago by fawazfebin30 • updated 20 months ago by Gordon Smyth39k
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Using Gage and pathview with previously processed data
rnaseq gage pathview R kegg written 3.7 years ago by bsguida0 • updated 3.7 years ago by Luo Weijun1.5k
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Accessing KEGG (errors w/ KEGGREST)
keggrest kegg written 2.8 years ago by sampsonj740 • updated 2.8 years ago by Gordon Smyth39k
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Gene-Metabolite and Metabolite-Pathway network from KEGG with KEGGREST
keggrest kegg written 19 months ago by hkarakurt20 • updated 19 months ago by 7kemZmani10
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