6
votes
0
answers
910
views
7 follow
0
answers
11
votes
2
answers
1.9k
views
9 follow
2
answers
6
votes
0
answers
634
views
5 follow
0
answers
7
votes
1
answer
3.3k
views
7 follow
1
answer
Removing batch effects with sva and combat using the sva package
regression limma sva written 5.9 years ago by Jeff Leek490 • updated 5.9 years ago by Andrew Teschendorff60
10
votes
2
answers
2.5k
views
7 follow
2
answers
using duplicateCorrelation with limma+voom for RNA-seq data
limma voom written 3.5 years ago by John Blischak120 • updated 2.5 years ago by Gordon Smyth32k
14
votes
4
answers
3.2k
views
9 follow
4
answers
Removing continuous covariate effects in limma analysis
microarray limma written 2.6 years ago by Pauly Lin60 • updated 10 weeks ago by Gordon Smyth32k
11
votes
1
answer
411
views
7 follow
1
answer
How to remove more than two batches in my data-sets
rnaseq limma removebatcheffect() written 16 months ago by yi.huang30 • updated 16 months ago by Gordon Smyth32k
3
votes
1
answer
363
views
6 follow
1
answer
1
vote
0
answers
514
views
0
answers
4
votes
1
answer
973
views
1
answer
missing value handling in limma
limma written 13.5 years ago by xiaocui zhu70 • updated 13.5 years ago by Gordon Smyth32k
1
vote
1
answer
1.7k
views
1
answer
a question on creating model.matrix using limma
limma written 11.4 years ago by Srinivas Iyyer590 • updated 11.4 years ago by James W. MacDonald45k
1
vote
0
answers
357
views
0
answers
1
vote
1
answer
237
views
1
answer
Separate Channel Analysis of Two-Color Data
limma written 11.0 years ago by Gordon Smyth32k • updated 11.0 years ago by Naomi Altman6.0k
2
votes
0
answers
1.2k
views
0
answers
3
votes
1
answer
228
views
1
answer
model.matrix()
limma written 9.3 years ago by Yisong Zhen200 • updated 9.3 years ago by Gordon Smyth32k
2
votes
0
answers
422
views
0
answers
Limma: NA handling in contrasts.fit
limma written 8.6 years ago by Gordon Smyth32k
1
vote
0
answers
425
views
0
answers
4
votes
4
answers
692
views
4
answers
limma for spectral counts
limma written 7.1 years ago by Yolande Tra120 • updated 7.1 years ago by Pavelka, Norman70
2
votes
0
answers
818
views
0
answers
1
vote
1
answer
848
views
1
answer
Limma model parameters design, combining a paired with a factorial design
limma written 6.1 years ago by john herbert550 • updated 6.1 years ago by James W. MacDonald45k
3
votes
1
answer
528
views
1
answer
limma: correcting for a correlation between contrasts
limma written 4.4 years ago by Alex Gutteridge650 • updated 4.4 years ago by Gordon Smyth32k
2
votes
0
answers
818
views
0
answers
6
votes
2
answers
6.7k
views
5 follow
2
answers
Differential expression of RNA-seq data using limma and voom()
limma written 4.0 years ago by Jon Bråte130 • updated 16 months ago by Gordon Smyth32k
3
votes
1
answer
620
views
1
answer
arrayQualityMetrics for Agilent one color data
normalization limma arrayqualitymetrics written 4.0 years ago by Yong Li50 • updated 4.0 years ago by James W. MacDonald45k
4
votes
1
answer
390
views
5 follow
1
answer
simultaneous use of robust and weighting methods in limma.
limma robust arrayweights written 4.0 years ago by Richard Friedman80 • updated 2.9 years ago by Gordon Smyth32k
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