6
votes
0
answers
1.2k
views
7 follow
0
answers
14
votes
2
answers
4.4k
views
9 follow
2
answers
using duplicateCorrelation with limma+voom for RNA-seq data
limma voom written 4.6 years ago by John Blischak150 • updated 3.6 years ago by Gordon Smyth35k
11
votes
2
answers
3.1k
views
9 follow
2
answers
11
votes
0
answers
11k
views
5 follow
0
answers
6
votes
0
answers
927
views
5 follow
0
answers
8
votes
1
answer
4.1k
views
7 follow
1
answer
Removing batch effects with sva and combat using the sva package
regression limma sva written 7.0 years ago by Jeff Leek520 • updated 7.0 years ago by Andrew Teschendorff60
18
votes
4
answers
5.0k
views
11 follow
4
answers
Removing continuous covariate effects in limma analysis
microarray limma written 3.7 years ago by Pauly Lin80 • updated 15 months ago by Gordon Smyth35k
14
votes
3
answers
6.5k
views
12 follow
3
answers
Nanostring analysis with limma
limma nanostring written 3.6 years ago by mali salmon330 • updated 3.6 years ago by ker6110
12
votes
1
answer
3.6k
views
6 follow
1
answer
Understanding contrasts limma
limma design and contrast matrix written 3.2 years ago by Andy9160 • updated 3.2 years ago by Aaron Lun21k
11
votes
1
answer
620
views
7 follow
1
answer
How to remove more than two batches in my data-sets
rnaseq limma removebatcheffect() written 2.4 years ago by yi.huang30 • updated 2.4 years ago by Gordon Smyth35k
3
votes
1
answer
526
views
6 follow
1
answer
13
votes
2
answers
611
views
9 follow
2
answers
Camera and ROAST
limma written 12 months ago by Nuno Pires20 • updated 12 months ago by Gordon Smyth35k
9
votes
1
answer
388
views
7 follow
1
answer
1
vote
0
answers
885
views
0
answers
4
votes
1
answer
1.3k
views
1
answer
missing value handling in limma
limma written 14.5 years ago by xiaocui zhu70 • updated 14.5 years ago by Gordon Smyth35k
1
vote
1
answer
1.9k
views
1
answer
makeContrasts in limma
limma written 13.5 years ago by He, Yiwen NIH/CIT360 • updated 13.5 years ago by Gordon Smyth35k
1
vote
2
answers
1.5k
views
2
answers
Limma: correct calculation of B statistics (log odds)
microarray genetics limma limmagui written 12.6 years ago by Gordon Smyth35k • updated 12.6 years ago by J.delasHeras@ed.ac.uk1.9k
1
vote
1
answer
3.3k
views
1
answer
a question on creating model.matrix using limma
limma written 12.4 years ago by Srinivas Iyyer590 • updated 12.4 years ago by James W. MacDonald48k
1
vote
0
answers
540
views
0
answers
1
vote
1
answer
391
views
1
answer
Separate Channel Analysis of Two-Color Data
limma written 12.0 years ago by Gordon Smyth35k • updated 12.0 years ago by Naomi Altman6.0k
3
votes
0
answers
2.5k
views
0
answers
3
votes
1
answer
299
views
1
answer
model.matrix()
limma written 10.4 years ago by Yisong Zhen200 • updated 10.4 years ago by Gordon Smyth35k
2
votes
0
answers
629
views
0
answers
Limma: NA handling in contrasts.fit
limma written 9.7 years ago by Gordon Smyth35k
1
vote
0
answers
576
views
0
answers
4
votes
4
answers
965
views
4
answers
limma for spectral counts
limma written 8.1 years ago by Yolande Tra120 • updated 8.1 years ago by Pavelka, Norman70
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