6
votes
0
answers
1.1k
views
7 follow
0
answers
13
votes
2
answers
4.0k
views
9 follow
2
answers
using duplicateCorrelation with limma+voom for RNA-seq data
limma voom written 4.3 years ago by John Blischak140 • updated 3.4 years ago by Gordon Smyth35k
11
votes
2
answers
2.8k
views
9 follow
2
answers
6
votes
0
answers
871
views
5 follow
0
answers
8
votes
1
answer
4.0k
views
7 follow
1
answer
Removing batch effects with sva and combat using the sva package
regression limma sva written 6.8 years ago by Jeff Leek520 • updated 6.8 years ago by Andrew Teschendorff60
17
votes
4
answers
4.6k
views
10 follow
4
answers
Removing continuous covariate effects in limma analysis
microarray limma written 3.5 years ago by Pauly Lin80 • updated 12 months ago by Gordon Smyth35k
13
votes
3
answers
6.3k
views
12 follow
3
answers
Nanostring analysis with limma
limma nanostring written 3.4 years ago by mali salmon330 • updated 3.4 years ago by ker610
12
votes
1
answer
3.0k
views
6 follow
1
answer
Understanding contrasts limma
limma design and contrast matrix written 3.0 years ago by Andy9160 • updated 3.0 years ago by Aaron Lun21k
11
votes
1
answer
555
views
7 follow
1
answer
How to remove more than two batches in my data-sets
rnaseq limma removebatcheffect() written 2.2 years ago by yi.huang30 • updated 2.2 years ago by Gordon Smyth35k
3
votes
1
answer
484
views
6 follow
1
answer
1
vote
0
answers
811
views
0
answers
4
votes
1
answer
1.2k
views
1
answer
missing value handling in limma
limma written 14.3 years ago by xiaocui zhu70 • updated 14.3 years ago by Gordon Smyth35k
10
votes
0
answers
9.2k
views
0
answers
1
vote
1
answer
1.7k
views
1
answer
makeContrasts in limma
limma written 13.3 years ago by He, Yiwen NIH/CIT360 • updated 13.3 years ago by Gordon Smyth35k
1
vote
2
answers
1.4k
views
2
answers
Limma: correct calculation of B statistics (log odds)
microarray genetics limma limmagui written 12.4 years ago by Gordon Smyth35k • updated 12.4 years ago by J.delasHeras@ed.ac.uk1.9k
1
vote
1
answer
2.9k
views
1
answer
a question on creating model.matrix using limma
limma written 12.2 years ago by Srinivas Iyyer590 • updated 12.2 years ago by James W. MacDonald47k
1
vote
0
answers
511
views
0
answers
1
vote
1
answer
360
views
1
answer
Separate Channel Analysis of Two-Color Data
limma written 11.8 years ago by Gordon Smyth35k • updated 11.8 years ago by Naomi Altman6.0k
3
votes
0
answers
2.2k
views
0
answers
3
votes
1
answer
279
views
1
answer
model.matrix()
limma written 10.2 years ago by Yisong Zhen200 • updated 10.1 years ago by Gordon Smyth35k
2
votes
0
answers
575
views
0
answers
Limma: NA handling in contrasts.fit
limma written 9.5 years ago by Gordon Smyth35k
1
vote
0
answers
549
views
0
answers
4
votes
4
answers
908
views
4
answers
limma for spectral counts
limma written 7.9 years ago by Yolande Tra120 • updated 7.9 years ago by Pavelka, Norman70
1
vote
2
answers
1.1k
views
2
answers
Regression using LIMMA
affy limma dose written 7.9 years ago by fire1976 wyoming380 • updated 7.9 years ago by Naomi Altman6.0k
2
votes
0
answers
1.1k
views
0
answers
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