1
vote
2
answers
39
views
2
answers
EdgeR Multivariate Analysis question
limma edger written 3 days ago by joangibert140 • updated 2 days ago by Gordon Smyth34k
1
vote
1
answer
37
views
1
answer
how to run replicates at different time points
limma written 3 days ago by devarajsaranya0 • updated 2 days ago by Aaron Lun20k
1
vote
1
answer
106
views
1
answer
GSEA for RNA-seq analysis
limma gsea ttest preranked gsea written 4 days ago by imalumberjack0 • updated 3 days ago by Gordon Smyth34k
0
votes
0
answers
32
views
0
answers
3
votes
1
answer
49
views
1
answer
8
votes
2
answers
93
views
2
answers
Limma weights, non-specific interactions
limma weight nonspecific filtering written 12 days ago by andrew.birnberg20 • updated 6 days ago by Gordon Smyth34k
1
vote
1
answer
30
views
1
answer
Remove box frame from vennDiagram plot in limma
limma R venndiagram written 7 days ago by bajwa.m0 • updated 7 days ago by James W. MacDonald47k
3
votes
1
answer
46
views
1
answer
Conditions for using Fry
limma mroast fry written 9 days ago by siajunren0 • updated 8 days ago by Gordon Smyth34k
3
votes
1
answer
48
views
1
answer
Is number of rotations dependent on number of gene sets in mroast?
limma mroast written 9 days ago by siajunren0 • updated 8 days ago by Gordon Smyth34k
5
votes
2
answers
78
views
2
answers
Why do I have this perfect volcano plot from Limma?
limma written 9 days ago by SmallChess10 • updated 9 days ago by Gordon Smyth34k
3
votes
1
answer
127
views
1
answer
3
votes
1
answer
62
views
1
answer
ANOVA-like test via treat() in limma
limma anova written 14 days ago by k.vitting.seerup20 • updated 13 days ago by Gordon Smyth34k
1
vote
1
answer
55
views
1
answer
0
votes
0
answers
71
views
0
answers
1
vote
1
answer
59
views
1
answer
Limma: technical and biological replicates in proteomics data
proteomics limma replicates written 17 days ago by ivansilbern0 • updated 16 days ago by Aaron Lun20k
3
votes
1
answer
79
views
1
answer
Combining groups in a LIMMA design
limma written 19 days ago by Ahdee40
1
vote
1
answer
73
views
1
answer
Papers using limma package for qPCR arrays
limma written 23 days ago by Daniel Moreno0 • updated 22 days ago by Gordon Smyth34k
3
votes
1
answer
84
views
1
answer
Cannot retrieve DE genes from goana GO terms
limma edger goana written 27 days ago by b.nota300 • updated 26 days ago by Aaron Lun20k
0
votes
1
answer
103
views
1
answer
3
votes
1
answer
77
views
1
answer
Limma trend test with pre/post design and technical replicates
limma limma-trend written 28 days ago by Jenny G0 • updated 28 days ago by Aaron Lun20k
0
votes
1
answer
47
views
1
answer
Problem with coefficients that are not estimable (limma)
limma batch effect written 29 days ago by rrm380 • updated 28 days ago by Aaron Lun20k
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