1
vote
1
answer
41
views
1
answer
ANOVA in ROAST
limma written 1 day ago by chris86380 • updated 1 day ago by Gordon Smyth33k
1
vote
1
answer
49
views
1
answer
Problem with write.fit function
limma write.fit written 4 days ago by tillmann.ruland0 • updated 4 days ago by Aaron Lun19k
1
vote
1
answer
58
views
1
answer
1
vote
1
answer
50
views
1
answer
0
votes
1
answer
74
views
1
answer
2
votes
2
answers
89
views
2
answers
1
vote
1
answer
38
views
1
answer
topTable error: data.frame(logFC = M[top]) : row names contain missing values
limma written 19 days ago by owen.whitley0 • updated 19 days ago by Aaron Lun19k
0
votes
1
answer
52
views
1
answer
Getting Significance for second factor (bioreplicate/subject) when using limma.
limma anova written 20 days ago by wewolski10 • updated 19 days ago by Aaron Lun19k
0
votes
0
answers
56
views
0
answers
2
votes
1
answer
67
views
1
answer
How can I check the quality of code I have written? How to QC?
limma R bioconductor written 22 days ago by BIOAWY10 • updated 22 days ago by Martin Morgan ♦♦ 21k
2
votes
1
answer
138
views
1
answer
paired two groups comparison using limma
limma paired test written 23 days ago by fansili201310 • updated 22 days ago by Aaron Lun19k
2
votes
2
answers
110
views
2
answers
0
votes
1
answer
226
views
1
answer
3
votes
1
answer
85
views
1
answer
Calling svaseq() multiple times
limma edger sva svaseq written 28 days ago by cats_dogs0 • updated 27 days ago by Ryan C. Thompson6.8k
6
votes
1
answer
135
views
1
answer
Batch Correction with only one sample in a batch
limma deseq2 batch effect written 4 weeks ago by i.sudbery10 • updated 4 weeks ago by Ryan C. Thompson6.8k
0
votes
1
answer
143
views
1
answer
question about "write.fit" function in limma-voom
limma write.fit method nestedf written 8 months ago by aec40 • updated 5 weeks ago by Gordon Smyth33k
2
votes
1
answer
94
views
1
answer
T-test in limma
limma t test written 5 weeks ago by zhang.jianhai0 • updated 5 weeks ago by Gordon Smyth33k
0
votes
1
answer
92
views
1
answer
LRT on microarray data
limma written 5 weeks ago by ssabunc10 • updated 5 weeks ago by Gordon Smyth33k
1
vote
1
answer
104
views
1
answer
Error message with Voom with blocked design matrix
limma voom blocked design written 5 weeks ago by raf420 • updated 5 weeks ago by Gordon Smyth33k
0
votes
2
answers
84
views
2
answers
Limma design matrix
limma design matrix written 6 weeks ago by R40 • updated 6 weeks ago by Gordon Smyth33k
3
votes
2
answers
142
views
2
answers
Limma - how to manage huge differences in library sizes
limma written 6 weeks ago by baus870 • updated 6 weeks ago by Gordon Smyth33k
1
vote
1
answer
81
views
1
answer
3
votes
1
answer
116
views
1
answer
0
votes
1
answer
141
views
1
answer
TPM data Differential expression analysis
limma edger differential gene expression written 6 weeks ago by ghmdsr0 • updated 6 weeks ago by Gordon Smyth33k
0
votes
1
answer
102
views
1
answer
Interpretation of p-value plot
limma differential expression p values written 6 weeks ago by karlien.springael0 • updated 6 weeks ago by Gordon Smyth33k
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