3
votes
1
answer
46
views
1
answer
Using limma to model gene expression changes with age
limma linear model written 23 days ago by KCLiv0 • updated 23 days ago by Gordon Smyth34k
1
vote
0
answers
58
views
0
answers
2
votes
1
answer
209
views
1
answer
Age covariate continuous vs. categorical
deseq2 linear model covariates age design model written 5 months ago by M_K0 • updated 5 months ago by Michael Love18k
3
votes
1
answer
207
views
1
answer
3
votes
1
answer
365
views
1
answer
DESeq2 batch effect with and without interaction model
deseq2 R linear model rna-seq design matrix written 8 months ago by gdagstn0 • updated 8 months ago by Michael Love18k
3
votes
1
answer
257
views
1
answer
Intercept in design matrix
limma linear model intercept written 12 months ago by marconerdaum0 • updated 12 months ago by Aaron Lun20k
0
votes
1
answer
355
views
1
answer
Visualizing Linear Model Coefficients in R
graph deseq2 R linear model written 13 months ago by nathanguy140 • updated 13 months ago by Michael Love18k
0
votes
1
answer
386
views
1
answer
DESeq2: How to find out how well the model fits the data?
rnaseq linear model fit dseq2 written 14 months ago by lina.faller0 • updated 14 months ago by Bio_Ram0
3
votes
2
answers
339
views
2
answers
limma for Paired Samples vs. lme
limma linear model paired samples written 14 months ago by wewolski10 • updated 14 months ago by Aaron Lun20k
6
votes
1
answer
714
views
1
answer
Dealing with (blood) contamination in RNA-seq data
rnaseq limma linear model rna-seq written 16 months ago by Thomas Sandmann60 • updated 16 months ago by Aaron Lun20k
1
vote
1
answer
715
views
1
answer
1
vote
2
answers
458
views
2
answers
2
votes
2
answers
1.3k
views
5 follow
2
answers
0
votes
0
answers
404
views
0
answers
8
votes
1
answer
780
views
1
answer
1
vote
0
answers
746
views
0
answers
4
votes
2
answers
601
views
2
answers
5
votes
1
answer
758
views
1
answer
Translating model formula from DESeq to DEXSeq
dexseq linear model formula written 2.7 years ago by Cornwell, Adam110 • updated 2.7 years ago by Alejandro Reyes1.6k
3
votes
2
answers
1.1k
views
2
answers
ribosome profiling analysis with different dispersions
deseq2 linear model stats ribosome profiling written 2.9 years ago by Jake60 • updated 2.9 years ago by Ryan C. Thompson6.8k
3
votes
1
answer
728
views
1
answer
2
votes
1
answer
674
views
1
answer
Check DESeq2 contrasts for exon vs intron changes
deseq2 linear model written 3.0 years ago by Jake60 • updated 3.0 years ago by Michael Love18k
14
votes
2
answers
890
views
2
answers
3
votes
1
answer
1.3k
views
1
answer
Check understanding of linear model
deseq2 linear model written 3.2 years ago by Jake60 • updated 3.2 years ago by James W. MacDonald46k
3
votes
1
answer
1.5k
views
1
answer
2
votes
1
answer
567
views
1
answer
Sample power selection for limma analysis in R
limma linear model written 3.5 years ago by svlachavas610 • updated 3.5 years ago by Gordon Smyth34k
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