Showing: medipsreset
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How does the 'paired' argument works in MeDIPS 1.23.2
medips R medip-seq pair-end reads written 3.3 years ago by stb0 • updated 3.3 years ago by Lukas Chavez510
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561
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Gene Symbol Annotation
medips written 3.4 years ago by peter.mcerlean0 • updated 3.4 years ago by Lukas Chavez510
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414
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TMM Normalization within MEDIPS ups some zero counts, is this normal?
medips written 3.4 years ago by jenniferlneary0 • updated 3.4 years ago by Lukas Chavez510
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593
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MeDIPS and use of the 'bwa' parameter
medips R bwa medip-seq written 3.4 years ago by stb0 • updated 3.4 years ago by Lukas Chavez510
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2
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438
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Alternative methylation contexts with MEDIPS?
medips written 3.5 years ago by Chris Fields60 • updated 3.5 years ago by Matthias Lienhard140
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4
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592
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4
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MEDIPS - input
medips input written 3.6 years ago by GFM20
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Error in MEDIPS.calibrationCurve looking for different methylation profiles
medips R written 3.9 years ago by pertille0 • updated 3.9 years ago by Lukas Chavez510
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640
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How to do FDR p.adj manually on "mr.edgeR object" from MEDIPS package?
edger medips R written 3.9 years ago by pertille0 • updated 3.9 years ago by Lukas Chavez510
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602
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How createSet from reduced "paire-ed" sequencing on MeDIPS?
medips R input files written 3.9 years ago by pertille0 • updated 3.9 years ago by Lukas Chavez510
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1
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635
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MEDIPS stable version problem
medips written 4.1 years ago by chengyuanzhi19860 • updated 4.0 years ago by Lukas Chavez510
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1
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Normalizing Depth Coverage between samples MEDIPS
normalization edger medips depth "r" written 4.2 years ago by pertille0 • updated 4.2 years ago by Aaron Lun25k
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605
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New to R: How to use your own data for Bioconductor Packages
rsamtools medips written 4.4 years ago by hseepany0 • updated 4.4 years ago by Dan Tenenbaum8.2k
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530
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MEDIPS test data lack of 4 files
medips written 4.5 years ago by yanzhangusa0 • updated 4.5 years ago by Lukas Chavez510
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1.2k
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MEDIPS vs MACS: why does MEDIPS generate more conservative p-values
medips p-value macs written 4.6 years ago by tptacek30500 • updated 4.6 years ago by Lukas Chavez510
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597
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MEDIPS: Any way to get more columns/data from MEDIPS.mergeFrames?
medips mergeframes written 4.7 years ago by tptacek30500 • updated 4.7 years ago by Lukas Chavez510
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843
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MEDIPS - RPKM
medips written 4.8 years ago by malbert10
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699
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1
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MEDIPS : Populating fragments from Paired End reads
medips written 4.8 years ago by kuldeep55340 • updated 4.8 years ago by Lukas Chavez510
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819
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Non-CpG Methylation in MEDIPS Package
medips written 4.8 years ago by mamd2010 • updated 4.8 years ago by Matthias Lienhard140
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MEDIPS: Output appears to be truncated
medips written 4.8 years ago by tptacek30500 • updated 4.8 years ago by Lukas Chavez510
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