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Convert Chromosome postions to hgnc_symbol using R
microarray written 1 day ago by joyk2a • 0 • updated 22 hours ago by Mike Smith • 4.0k
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3' microarray data using Affy - can't find cdf file, please help!
microarray cdf affy written 2 days ago by meganlloyd • 0 • updated 1 day ago by James W. MacDonald ♦ 52k
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EventPointer analysis error
microarray eventpointer written 13 days ago by paulina10134 • 0 • updated 13 days ago by shepherl ♦♦ 1.7k
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Package not found bioconductor gCMAP
microarray gcmap package cmap gcampweb written 15 days ago by bastien.chassagnol • 0 • updated 15 days ago by Martin Morgan ♦♦ 24k
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Affymetrix miRNA4.1 / oligo package / pd.mirna.4.1
mirna microarray pdinfobuilder oligo package pd.mirna written 2.5 years ago by rolan.zauner • 10 • updated 21 days ago by soumyab.g • 0
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limma Multi-level Experiments - Main effect test
microarray affy limma written 28 days ago by cyusufd • 0 • updated 24 days ago by Gordon Smyth ♦ 39k
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Longitudinal Time-Course microarray experiment with two time points
microarray dge edge written 29 days ago by joanasabinopinto • 0 • updated 29 days ago by Gordon Smyth ♦ 39k
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Analyse Microarray Data - AVG_Signal
microarray limma written 4 weeks ago by Alex Greenshields-Watson • 0 • updated 29 days ago by Gordon Smyth ♦ 39k
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In SVA, the percent of biological variable of interest didnot change after adding SV1
microarray sva R combat covariates written 6 weeks ago by dhwani2410 • 0 • updated 6 weeks ago by Martin Morgan ♦♦ 24k
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Annotation Dbi replaced by utils
microarray annotation written 6 weeks ago by ekl • 0
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What should I do with the package:org.Hs.eg.db?
microarray affy written 6 weeks ago by 2426986765 • 10 • updated 6 weeks ago by Martin Morgan ♦♦ 24k
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Error in write.fit step using limma package for microarray analysis
microarray limma written 6 weeks ago by sagayanilo • 0 • updated 6 weeks ago by James W. MacDonald ♦ 52k
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Help with Affymetrix Human Genome U95A 2.0
microarray written 10 weeks ago by pablo.giraudi • 0
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Problem in installing maEndToEnd package
microarray maendtoend written 4 months ago by Jack • 0
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Pair-wise Limma Analysis with time series data and two levels (control and treatment)
microarray limma paired deg time series written 10 weeks ago by kawess • 0 • updated 10 weeks ago by Gordon Smyth ♦ 39k
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How to check whether experimental covariates are confounded with our group of interest?
microarray covariates written 10 weeks ago by english.server • 20
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Subsetting a data frame generated by topTable() {limma}
microarray limma toptable written 12 weeks ago by Alexander Azarian • 20 • updated 12 weeks ago by Gordon Smyth ♦ 39k
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AnnotationData Packages for Agilent microarrays
microarray annotation limma agilent .db written 3 months ago by Alexander Azarian • 20 • updated 3 months ago by James W. MacDonald ♦ 52k
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Does anyone have experience using the massiR package?
microarray probe R massir written 3 months ago by Steve Lowe • 10
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massiR Extracting and Plotting Y Chr Probe Data
microarray probe written 3 months ago by Steve Lowe • 10
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Different versions of r/affy combination may lead to differences in rma normalization results
microarray affy affy package rma normalization written 3 months ago by yshuang • 0
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CDF not found
microarray affy written 3 months ago by ijvechetti • 0 • updated 3 months ago by Guido Hooiveld • 2.5k
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Determining survival correlation among probes
microarray annotation probe written 4 months ago by sbrackett007 • 0
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Limma Design matrix for time series+treatment+batch effect
microarray limma design matrix factorial written 4 months ago by senthil.duraikannukailasam • 0 • updated 4 months ago by Aaron Lun • 25k
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Any recommended workflow for incrementally selecting top ranked genes by using mRMR feature selection?
microarray gene-filtering mrmr parallel-processing bioconductor-package written 4 months ago by Jurat Shahidin • 70
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