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3
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1
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395
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1
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Differential drug dosage effect between two genotypes in limma
limma linear model model formula dose-response written 16 months ago by biominer • 10 • updated 16 months ago by James W. MacDonald ♦ 49k
4
votes
1
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809
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1
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edgeR: How to set model for glmQLFTest in time-course experiment (compared to glmLRT?
timecourse edger model edger "glmqlftest()" written 20 months ago by heikki.sarin • 0 • updated 20 months ago by Ryan C. Thompson ♦ 7.3k
5
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1
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811
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edgeR : How to test differential exon expression on case/control study across all time points when accounting for the within subject variability?
model differential exon usage model.matrix multiple time points egder written 20 months ago by heikki.sarin • 0
0
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0
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549
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How construct a model for case-control time-course experiment in DEXseq?
timecourse dexseq model model.matrix written 21 months ago by heikki.sarin • 0
0
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0
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744
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Proper dataset form and model for DEXeq analysis
dexseq model rna-seq model.matrix written 21 months ago by heikki.sarin • 0 • updated 21 months ago by Michael Love ♦ 22k
1
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2
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389
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EdgeR model not of full rank
edger model rank written 21 months ago by philip.freda • 0
2
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1
answer
528
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1
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DESeq2 design matrix for timecourse
rnaseq timecourse deseq2 model experimental design written 2.5 years ago by axel.thieffry • 10 • updated 2.5 years ago by Michael Love ♦ 22k
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2
answers
331
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baseMean differencies according to the model
deseq2 model written 2.7 years ago by jrivera • 0
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1.4k
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DESeq2 model with blocking factor + interaction term
deseq2 model written 3.8 years ago by da.de • 10 • updated 3.8 years ago by Simon Anders • 3.5k
1
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2
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937
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2
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Limma linear models
limma model goodness fit linear written 4.2 years ago by nonCodingGene • 10 • updated 4.2 years ago by Gordon Smyth ♦ 37k
13
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1
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5.4k
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1
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DESeq2 Model Design
deseq2 linear model model written 4.4 years ago by andrew.j.skelton73 • 310 • updated 4.4 years ago by James W. MacDonald ♦ 49k
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