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Diffbind with multiple blocking factors
diffbind model blocking written 7 weeks ago by melnuesch • 10
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Differential drug dosage effect between two genotypes in limma
limma linear model model formula dose-response written 2.0 years ago by biominer • 10 • updated 2.0 years ago by James W. MacDonald ♦ 52k
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edgeR: How to set model for glmQLFTest in time-course experiment (compared to glmLRT?
timecourse edger model edger "glmqlftest()" written 2.4 years ago by heikki.sarin • 0 • updated 2.4 years ago by Ryan C. Thompson ♦ 7.4k
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edgeR : How to test differential exon expression on case/control study across all time points when accounting for the within subject variability?
model differential exon usage model.matrix multiple time points egder written 2.4 years ago by heikki.sarin • 0
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How construct a model for case-control time-course experiment in DEXseq?
timecourse dexseq model model.matrix written 2.4 years ago by heikki.sarin • 0
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Proper dataset form and model for DEXeq analysis
dexseq model rna-seq model.matrix written 2.4 years ago by heikki.sarin • 0 • updated 2.4 years ago by Michael Love ♦ 26k
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EdgeR model not of full rank
edger model rank written 2.4 years ago by philip.freda • 0
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DESeq2 design matrix for timecourse
rnaseq timecourse deseq2 model experimental design written 3.1 years ago by axel.thieffry • 10 • updated 3.1 years ago by Michael Love ♦ 26k
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baseMean differencies according to the model
deseq2 model written 3.4 years ago by jrivera • 0
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DESeq2 model with blocking factor + interaction term
deseq2 model written 4.4 years ago by da.de • 10 • updated 4.4 years ago by Simon Anders • 3.6k
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Limma linear models
limma model goodness fit linear written 4.9 years ago by nonCodingGene • 10 • updated 4.9 years ago by Gordon Smyth ♦ 39k
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DESeq2 Model Design
deseq2 linear model model written 5.1 years ago by andrew.j.skelton73 • 320 • updated 5.0 years ago by James W. MacDonald ♦ 52k
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