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4
votes
1
answer
503
views
1
answer
edgeR: How to set model for glmQLFTest in time-course experiment (compared to glmLRT?
timecourse edger model edger "glmqlftest()" written 6 weeks ago by heikki.sarin • 0 • updated 6 weeks ago by Ryan C. Thompson ♦ 5.9k
5
votes
1
answer
526
views
1
answer
edgeR : How to test differential exon expression on case/control study across all time points when accounting for the within subject variability?
model differential exon usage model.matrix multiple time points egder written 7 weeks ago by heikki.sarin • 0
0
votes
0
answers
323
views
0
answers
How construct a model for case-control time-course experiment in DEXseq?
timecourse dexseq model model.matrix written 7 weeks ago by heikki.sarin • 0
0
votes
0
answers
523
views
0
answers
Proper dataset form and model for DEXeq analysis
dexseq model rna-seq model.matrix written 8 weeks ago by heikki.sarin • 0 • updated 8 weeks ago by Michael Love ♦ 13k
1
vote
2
answers
121
views
2
answers
EdgeR model not of full rank
edger model rank written 9 weeks ago by philip.freda • 0
2
votes
1
answer
237
views
1
answer
DESeq2 design matrix for timecourse
rnaseq timecourse deseq2 model experimental design written 10 months ago by axel.thieffry • 10 • updated 10 months ago by Michael Love ♦ 13k
1
vote
2
answers
198
views
2
answers
baseMean differencies according to the model
deseq2 model written 14 months ago by jrivera • 0
0
votes
1
answer
770
views
1
answer
DESeq2 model with blocking factor + interaction term
deseq2 model written 2.2 years ago by da.de • 10 • updated 2.2 years ago by Simon Anders • 3.4k
1
vote
2
answers
508
views
2
answers
Limma linear models
limma model goodness fit linear written 2.7 years ago by Biorunner88 • 10 • updated 2.7 years ago by Gordon Smyth ♦ 31k
13
votes
1
answer
2.5k
views
1
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DESeq2 Model Design
deseq2 linear model model written 2.8 years ago by andrew.j.skelton73 • 290 • updated 2.8 years ago by James W. MacDonald ♦ 44k
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