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3
votes
1
answer
293
views
1
answer
Differential drug dosage effect between two genotypes in limma
limma linear model model formula dose-response written 11 months ago by biominer • 10 • updated 11 months ago by James W. MacDonald ♦ 48k
4
votes
1
answer
733
views
1
answer
edgeR: How to set model for glmQLFTest in time-course experiment (compared to glmLRT?
timecourse edger model edger "glmqlftest()" written 15 months ago by heikki.sarin • 0 • updated 15 months ago by Ryan C. Thompson ♦ 7.0k
5
votes
1
answer
727
views
1
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edgeR : How to test differential exon expression on case/control study across all time points when accounting for the within subject variability?
model differential exon usage model.matrix multiple time points egder written 15 months ago by heikki.sarin • 0
0
votes
0
answers
486
views
0
answers
How construct a model for case-control time-course experiment in DEXseq?
timecourse dexseq model model.matrix written 15 months ago by heikki.sarin • 0
0
votes
0
answers
677
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0
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Proper dataset form and model for DEXeq analysis
dexseq model rna-seq model.matrix written 15 months ago by heikki.sarin • 0 • updated 15 months ago by Michael Love ♦ 20k
1
vote
2
answers
290
views
2
answers
EdgeR model not of full rank
edger model rank written 16 months ago by philip.freda • 0
2
votes
1
answer
444
views
1
answer
DESeq2 design matrix for timecourse
rnaseq timecourse deseq2 model experimental design written 2.0 years ago by axel.thieffry • 10 • updated 2.0 years ago by Michael Love ♦ 20k
1
vote
2
answers
288
views
2
answers
baseMean differencies according to the model
deseq2 model written 2.3 years ago by jrivera • 0
0
votes
1
answer
1.2k
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1
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DESeq2 model with blocking factor + interaction term
deseq2 model written 3.4 years ago by da.de • 10 • updated 3.4 years ago by Simon Anders • 3.5k
1
vote
2
answers
778
views
2
answers
Limma linear models
limma model goodness fit linear written 3.8 years ago by nonCodingGene • 10 • updated 3.8 years ago by Gordon Smyth ♦ 35k
13
votes
1
answer
4.6k
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1
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DESeq2 Model Design
deseq2 linear model model written 4.0 years ago by andrew.j.skelton73 • 310 • updated 4.0 years ago by James W. MacDonald ♦ 48k
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