Session expired
25
votes
2
answers
26k
views
8 follow
2
answers
conceptual question about FDR, FDR adjusted p-value and q-value
qvalue fdr written 5.6 years ago by Jack Luo360 • updated 21 months ago by Gordon Smyth34k
0
votes
4
answers
21k
views
4
answers
how to set R memory limit
written 6.5 years ago by wang peter2.0k • updated 6.5 years ago by Sunny Yu Liu80
3
votes
2
answers
20k
views
5 follow
2
answers
[DESEQ2] How to access the normalized data of a DESeqDataSet
deseq2 written 3.3 years ago by john40 • updated 3.3 years ago by Steve Lianoglou12k
13
votes
2
answers
19k
views
8 follow
2
answers
heatmap.2() get matrix after hierarchical clustering
clustering written 5.8 years ago by Guest User12k • updated 5.7 years ago by Thomas Girke1.6k
0
votes
0
answers
18k
views
0
answers
0
votes
1
answer
17k
views
1
answer
no method for coercing S4 class to a vector
written 3.8 years ago by Guest User12k • updated 3.8 years ago by Andrzej Oleś710
2
votes
1
answer
16k
views
1
answer
Row labels in a heatmap
microarray written 6.0 years ago by Liat Shavit Grievink60 • updated 6.0 years ago by James W. MacDonald46k
1
vote
2
answers
16k
views
2
answers
error in hclust function
written 6.1 years ago by Alyaa Mahmoud440 • updated 6.1 years ago by Thomas Girke1.6k
4
votes
1
answer
16k
views
1
answer
DESeq2 output explanation
deseq deseq2 written 3.7 years ago by francesca.defilippis40 • updated 3.7 years ago by Michael Love18k
0
votes
1
answer
15k
views
1
answer
Upgrading Bioconductor using BiocUpgrade
biocinstaller written 5.7 years ago by Lavinia Gordon480 • updated 5.7 years ago by Dan Tenenbaum ♦♦ 8.2k
0
votes
1
answer
15k
views
1
answer
Error in plot.window(...) : need finite 'xlim' values
written 9.7 years ago by T Joshi90 • updated 9.7 years ago by Sean Davis21k
11
votes
1
answer
13k
views
1
answer
RPKM, CPM and TMM
rnaseq edger differential expression written 3.0 years ago by Pauly Lin80 • updated 3.0 years ago by Aaron Lun20k
5
votes
3
answers
12k
views
3
answers
BLAST in R
written 7.1 years ago by Zoha Moztarzadeh20 • updated 2.6 years ago by mhahsler20
3
votes
2
answers
12k
views
7 follow
2
answers
Problems updating Bioconductor with R 3.2.0
r update upgrade written 3.2 years ago by daniil.sarkisyan10 • updated 3.2 years ago by Dan Tenenbaum ♦♦ 8.2k
0
votes
1
answer
11k
views
1
answer
Unable to find an inherited method for function ‘exprs’
biobase geoquery virtualarray written 4.9 years ago by Dave Tang210 • updated 4.9 years ago by Wolfgang Huber13k
0
votes
4
answers
10k
views
4
answers
installation packages
written 4.8 years ago by fran vino40 • updated 4.8 years ago by Steve Lianoglou12k
1
vote
1
answer
9.8k
views
1
answer
reading fasta file into R
biostrings written 6.0 years ago by Guest User12k • updated 6.0 years ago by Vincent J. Carey, Jr.6.2k
0
votes
1
answer
9.8k
views
1
answer
EdgeR LogCpm and LogFC values calculation
edger written 4.4 years ago by Gordon Smyth34k • updated 4.4 years ago by Koen Van den Berge90
0
votes
2
answers
9.8k
views
5 follow
2
answers
Fine tuning heatmap.2 graphics
microarray written 12.4 years ago by Marc Saric70 • updated 12.4 years ago by Wittner, Ben290
12
votes
3
answers
9.5k
views
7 follow
3
answers
2
votes
2
answers
9.4k
views
2
answers
Limma design and contrast matrix question.
microarray regression limma written 4.5 years ago by Matthew Thornton290 • updated 4.5 years ago by James W. MacDonald46k
20
votes
2
answers
9.2k
views
5 follow
2
answers
0
votes
2
answers
8.9k
views
2
answers
DESeq - plotPCA
deseq written 5.4 years ago by Guest User12k • updated 5.4 years ago by Simon Anders3.5k
8
votes
2
answers
8.8k
views
5 follow
2
answers
Differential expression of RNA-seq data using limma and voom()
limma written 4.6 years ago by Jon Bråte150 • updated 23 months ago by Gordon Smyth34k
9
votes
2
answers
8.8k
views
7 follow
2
answers
deseq2 filter the low counts
deseq2 lowcount written 3.4 years ago by aristotele_m20 • updated 21 months ago by pkachroo10
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