Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
0
votes
0
replies
97
views
News:
GSEA in R/Bioconductor course
GSEABenchmarkeR
pairedGSEA
GeneSetEnrichment
23 days ago
info
▴ 10
0
votes
0
replies
121
views
News:
EuroBioC2025: Abstract Submissions Open!
EuroBioC2025
Community
Conference
Bioconductor
4 weeks ago
Maria Doyle
▴ 100
0
votes
1
reply
233
views
News:
Gene Set Enrichment Analysis in Bioconductor course
GSEABase
GeneSetEnrichment
goseq
4 weeks ago • updated 23 days ago
info
▴ 10
0
votes
0
replies
10
views
Spam:
Maxwinbet77 | Popularitas Slot Deposit Ovo 5000 Naik Meningkat & Menguntungkan
JobPosting
customCMPdb
TransOmicsData
5 weeks ago
Abu
0
0
votes
0
replies
12
views
Spam:
SLOT DANA 5K >> Situs Slot Deposit Dana 5000 Maxwinbet77 Tanpa Potongan Dinamis & Elegan
GOTHiC
BubbleTree
PANR
5 weeks ago
Abu
0
0
votes
0
replies
81
views
News:
GBCC2025 Abstract Submissions & Registration Now Open!
Community
Conference
GBCC2025
Bioconductor
5 weeks ago
Maria Doyle
▴ 100
0
votes
0
replies
88
views
News:
Mass Spectrometry and Proteomics with R/Bioconductor course
cadd.v1.6.hg38
7 weeks ago
info
▴ 10
0
votes
0
replies
90
views
News:
Announcing the GBCC2025 Logo Design Winner!
Community
Conference
GBCC2025
Bioconductor
7 weeks ago
Maria Doyle
▴ 100
1
vote
0
replies
220
views
News:
Bioconductor Course, Kenya 2025: Applications Open!
Events
Community
Training
Africa
Bioconductor
7 weeks ago
Maria Doyle
▴ 100
0
votes
0
replies
167
views
News:
Online course: Gene set enrichment analysis in R/Bioconductor
GSEABenchmarkeR
10 weeks ago
info
▴ 10
0
votes
1
reply
9
views
Spam:
Small Business Directory Emerald Coast
BUScorrect
offtopic
updated 3 months ago by
shepherl
4.1k • written 3 months ago by
2zrcj3448p
0
1
vote
0
replies
738
views
News:
Bioconductor 3.20 is Released!
Bioconductor
Release
Software
4 months ago
shepherl
4.1k
0
votes
0
replies
208
views
News:
RNAseq data analysis with R/Bioconductor (4-15 November)
DESeq2
GenomicRanges
4 months ago
info
▴ 10
0
votes
0
replies
274
views
News:
Announcing the GBCC2025 Logo Design Contest!
Conference
Community
Galaxy
GBCC2025
Bioconductor
4 months ago
Maria Doyle
▴ 100
0
votes
0
replies
282
views
News:
List of Deprecated Packages for Bioc3.20
Devel
Bioconductor
Release
5 months ago
shepherl
4.1k
0
votes
0
replies
421
views
News:
Ensembl 113 has been released
ensembl
ensembldb
mart
biomaRt
5 months ago
Ensembl_Jorge
• 0
0
votes
0
replies
251
views
News:
Single-cell RNA-seq analysis with R/Bioconductor (online course)
SingleCellExperiment
SingleCell
5 months ago
info
▴ 10
0
votes
0
replies
316
views
News:
RNAseq data analysis with Bioconductor (online course)
DESeq2
SummarizedExperiment
5 months ago • updated 4 months ago
info
▴ 10
0
votes
1
reply
576
views
News:
Subject: Last 2 Seats Available for Metabolomics with R/Bioconductor Course (October 7-10)
Metabolomics
xcms
updated 5 months ago by
Harry
• 0 • written 5 months ago by
info
▴ 10
0
votes
0
replies
17
views
Spam:
Online gaming
EWCE
games
5 months ago
Lisandro Hermoso
0
0
votes
0
replies
289
views
News:
Opportunity for Carpentries Instructors to Teach Bioconductor in Africa
Carpentries
Community
Teaching
Bioconductor
5 months ago
Maria Doyle
▴ 100
0
votes
0
replies
369
views
News:
Metabolomics with R/Bioconductor Online Course
metabomxtr
MetaboCoreUtils
metabolomicsWorkbenchR
Metabolomics
6 months ago
info
▴ 10
2
votes
0
replies
641
views
News:
Save the Date for EuroBioC2025 in Barcelona!
EuroBioC2025
Conference
Bioconductor
Community
6 months ago
Maria Doyle
▴ 100
3
votes
3
replies
1.6k
views
News:
Bioconductor 3.20 Release Schedule
software
release
Release
updated 5 months ago by
Gordon Smyth
52k • written 6 months ago by
shepherl
4.1k
0
votes
1
reply
980
views
News:
Announcing GBCC 2025: The first-ever joint conference between Bioconductor and Galaxy!
Conference
Bioconductor
Community
written 6 months ago by
Maria Doyle
▴ 100
0
votes
1
reply
486
views
News:
BioCAsia 2024 Registration Now Open!
BioCAsia2024
Conference
Community
Bioconductor
6 months ago
Maria Doyle
▴ 100
0
votes
0
replies
400
views
News:
EuroBioC Updates: Important Deadlines
Conference
EuroBioC2024
Bioconductor
Community
EuroBioC
7 months ago
Maria Doyle
▴ 100
0
votes
0
replies
329
views
News:
Annual Nominations Open for CAB and TAB! Deadline Aug 31
TAB
CAB
Bioconductor
7 months ago
shepherl
4.1k
1
vote
0
replies
616
views
News:
Bioconductor Package Download Rate Limitation (HTTP 429)
downloads
http429
http
Bioconductor
8 months ago
shepherl
4.1k
0
votes
0
replies
377
views
News:
EuroBioC2024 Carpentries workshops Sep 2-3
Community
Workshop
Bioconductor
EuroBioC2024
8 months ago
Maria Doyle
▴ 100
0
votes
0
replies
368
views
News:
BioC2024 in-person registration closes soon (July 10)
BioC2024
Conference
Bioconductor
Community
8 months ago
Maria Doyle
▴ 100
0
votes
0
replies
379
views
News:
AnnotationHub and ExperimentHub Access Downtime
AnnotationHub
ExperimentHub
9 months ago
shepherl
4.1k
0
votes
1
reply
538
views
News:
Stop mirror service
metaMSdata
updated 9 months ago by
shepherl
4.1k • written 9 months ago by
khonda
• 0
0
votes
0
replies
23
views
Spam:
Drug Discovery
flowBeads
10 months ago
Zoe
0
0
votes
0
replies
374
views
News:
Legacy Bioconductor Installation
Installation
Bioconductor
10 months ago
shepherl
4.1k
0
votes
0
replies
421
views
News:
Online course: Network Analysis in Systems Biology with R/Bioconductor
SystemsBiology
Bioconductor
Network
10 months ago
info
▴ 10
0
votes
1
reply
396
views
News:
Bioconductor Build System
Builds
Bioconductor
written 10 months ago by
shepherl
4.1k
0
votes
0
replies
468
views
News:
BioC2024 Bioconductor Carpentries RNA-Seq Workshop July 22-23
BioC2024
Conference
Bioconductor
Community
10 months ago
Maria Doyle
▴ 100
1
vote
0
replies
618
views
News:
Ensembl 112 has been released.
ensembldb
biomaRt
ensemblrelease
10 months ago
Aleena
▴ 30
4
votes
0
replies
1.1k
views
News:
Bioconductor 3.19 is Released!
Release
Bioconductor
Packages
Software
10 months ago
shepherl
4.1k
0
votes
0
replies
419
views
News:
BioC2024 deadlines approaching
BioC2024
Bioconductor
Community
10 months ago
Maria Doyle
▴ 100
0
votes
0
replies
416
views
News:
Interested in the analysis of Spatial Omics data?
tidySpatialExperiment
SpatialExperiment
MoleculeExperiment
11 months ago
info
▴ 10
0
votes
1
reply
492
views
News:
Services
flowBeads
written 11 months ago by
creativepeptides2018
• 0
0
votes
0
replies
435
views
News:
TIDES USA 2024
flowBeads
11 months ago
bocsci11
• 0
0
votes
0
replies
596
views
News:
Important Release 3.18 Freeze Announcment
Release
release
Bioconductor
Bioconducto
11 months ago
shepherl
4.1k
0
votes
0
replies
385
views
News:
Course Manipulation of NGS Data for Genomic and Population Genetics Analyses
sequencing
Sequencing
SequencingData
11 months ago
communication
• 0
0
votes
0
replies
434
views
News:
Call for proposals: European CarpentryConnect - 12-14 November 2024, at EMBL Heidelberg
carpentry
conference
11 months ago
Wolfgang Huber
★ 13k
1
vote
0
replies
714
views
News:
Last Call: Nominations for Bioconductor Awards 2024! Deadline May 15
Recognition
Awards
Bioconductor
Bioc204
12 months ago • updated 10 months ago
shepherl
4.1k
0
votes
1
reply
550
views
News:
Join BOC Sciences at Drug Discovery Chemistry 2024
DFP
written 12 months ago by
cv.jam.zhxf17875
• 0
0
votes
1
reply
1.2k
views
News:
Bioconductor 3.19 Release Schedule
Release
release
Software
12 months ago
shepherl
4.1k
63 results • Page
1 of 2
Recent ...
Replies
Comment: DiffBind custom normalization factor
by
Abbie
• 0
Hello! Thanks so much for adding dba.normalize and all the documentation in the manual! I'm hoping I can ask a follow-up question here. I…
Answer: CpGs with genomic positions greater than the chromosome size in EPICv2?
by
James W. MacDonald
68k
All of the annotation packages provided by Bioconductor are simply repackaging of existing data from one or more sources. In this case, the…
Comment: Using TPM from tximport of Salmon output for singscore
by
Kent
• 0
Thank you for the suggestions Michael. Would you say that after filtering out the low count genes, `rlog(counts, blind = T)` is doing the s…
Comment: Using TPM from tximport of Salmon output for singscore
by
Michael Love
43k
For clustering generally we recommend `vst()` see the workflow for example. For working with individual samples, I can see how a scaling/t…
Comment: DESeq2 model - How to test case/control time course model when taking account wi
by
Michael Love
43k
I'd recommend working with a local statistician or someone familiar with linear models in R. I have to reserve my time on the support site …
Votes
clusterProfiler-GO enrichment Error
A: Machine learning in R book
Data preparation and Machine learning on time course RNAseq data
Data preparation and Machine learning on time course RNAseq data
Answer: Use of org.Rn.eg.db with GRCr8 reference genome
Awards
• All
Popular Question
to
Dario Strbenac
★ 1.6k
Popular Question
to
L
▴ 50
Popular Question
to
Gordon Smyth
52k
Popular Question
to
boczniak767
▴ 740
Popular Question
to
Luca
• 0
Locations
• All
Republic of Ireland,
29 minutes ago
The city by the bay,
11 hours ago
UPF, Barcelona, Spain,
20 hours ago
Sweden,
23 hours ago
Seattle, WA, United States,
1 day ago
Traffic: 433 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6