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News:
List of Deprecated Packages for Bioc3.18
Deprecation
devel
Bioconductor
Devel
19 months ago • updated 9 months ago
shepherl
4.1k
0
votes
11
replies
1.7k
views
News:
List of Deprecated Packages for Bioc3.19
Release
Devel
ExperimentData
Software
10 months ago • updated 12 weeks ago
shepherl
4.1k
1
vote
8
replies
1.8k
views
News:
Final List of Deprecated Package Bioc 3.9
deprecation
release
software
experimentData
News
written 5.8 years ago by
shepherl
4.1k
4
votes
9
replies
3.4k
views
News:
Ensembl release 84 is out!
ensembl
mart
release84
biomart
ensembl release
News
updated 8.8 years ago by
arielpaulson
▴ 20 • written 8.9 years ago by
Thomas Maurel
▴ 800
0
votes
3
replies
1.3k
views
News:
Final List of Deprecated Packages for Bioc3.11
software
annotation
experiment data
deprecated
News
updated 4.7 years ago by
kayla.interdonato
▴ 160 • written 4.8 years ago by
shepherl
4.1k
1
vote
3
replies
1.5k
views
News:
European Bioconductor meeting 2019, 9 - 10 December in Brussels, Belgium
conference
EuroBioc
News
5.3 years ago • updated 5.2 years ago
Laurent Gatto
1.6k
0
votes
5
replies
1.7k
views
News:
Final List of Deprecated Packages for Bioc3.14
ExperimentData
Deprecation
Software
Release
Workflow
3.3 years ago • updated 2.7 years ago
shepherl
4.1k
7
votes
4
replies
1.9k
views
News:
Bioconductor 3.7 is released
bioconductor
release
News
written 6.7 years ago by
Valerie Obenchain
★ 6.8k
0
votes
2
replies
1.5k
views
News:
Single Package Builder / New Package Submission
new submission
build report
packages
News
7.2 years ago
shepherl
4.1k
2
votes
2
replies
1.8k
views
News:
Final List of Deprecated Packages for Bioc3.13
Workflow
Software
ExperimentData
Deprecation
4.1 years ago • updated 3.7 years ago
shepherl
4.1k
1
vote
2
replies
1.7k
views
News:
Registrations are now open for BioC Asia 2022
Asia
BioCAsia
Conferences
Events
News
2.3 years ago • updated 2.2 years ago
Peter Hickey
▴ 740
1
vote
2
replies
1.6k
views
News:
Final List of Deprecated Packages for Bioc3.12
annotation
software
experimentdata
deprecated
News
4.3 years ago • updated 4.2 years ago
shepherl
4.1k
9
votes
8
replies
7.0k
views
News:
new package `ggtree` in devel branch
ggtree
phylogenetic
News
updated 9.9 years ago by
remi.tournebize
▴ 10 • written 10.0 years ago by
Guangchuang Yu
★ 1.2k
0
votes
4
replies
1.7k
views
News:
European Bioconductor Conference 2023 planning
Europe
Conference
EuroBioC
Events
News
written 2.2 years ago by
Maria Doyle
▴ 90
9
votes
4
replies
3.2k
views
News:
Experimental data package 'seqc'
seqc
rsubread
featurecounts
subjunc
ercc
News
10.2 years ago
Wei Shi
★ 3.6k
0
votes
2
replies
1.3k
views
News:
List of Deprecated Packages for Bioc3.17
Bioconductor
Deprecation
Devel
devel
21 months ago • updated 19 months ago
shepherl
4.1k
0
votes
2
replies
1.9k
views
News:
ChIPpeakAnno::getAnnotation get Exons
chippeakanno
News
updated 9.8 years ago by
Ou, Jianhong
★ 1.3k • written 9.8 years ago by
Julie Zhu
★ 4.3k
5
votes
5
replies
2.4k
views
News:
Ensembl 88 is out!
ensembl
ensembl mart
biomart
e!88
News
7.8 years ago
Thomas Maurel
▴ 800
4
votes
11
replies
1.9k
views
News:
Bioconductor 3.8 is released
bioconductor
news
release
News
updated 6.1 years ago by
restat110
• 0 • written 6.2 years ago by
Valerie Obenchain
★ 6.8k
7
votes
5
replies
3.2k
views
News:
European Bioconductor Developers Meeting: Cambridge 7/8th December 2015
developers
conference
workshop
News
updated 9.2 years ago by
Laurent Gatto
1.6k • written 9.4 years ago by
Mark Dunning
★ 1.1k
0
votes
2
replies
2.0k
views
News:
Final List of Deprecated Packages for Bioc3.10
annotation
experimentdata
deprecation
release
software
News
5.3 years ago • updated 5.2 years ago
shepherl
4.1k
6
votes
6
replies
3.8k
views
News:
Bioconductor Git/GitHub Mirrors
git
github
git-svn bridge
subversion
News
updated 9.6 years ago by
Guangchuang Yu
★ 1.2k • written 9.6 years ago by
Dan Tenenbaum
★ 8.2k
0
votes
2
replies
1.2k
views
News:
List of Deprecated Packages for Bioc3.7
deprecate
News
updated 7.1 years ago by
flipdiving2017
• 0 • written 7.2 years ago by
shepherl
4.1k
20
votes
13
replies
3.9k
views
News:
markdown is coming to the support site
markdown
News
7.5 years ago • updated 6.9 years ago
Lucas Schiffer
▴ 240
1
vote
1
reply
1.6k
views
News:
CRISPRseek: generate gRNAs in bed format, useScore argument
CRISPRseek
News
updated 10.2 years ago by
orkanilbay
• 0 • written 10.2 years ago by
Julie Zhu
★ 4.3k
0
votes
2
replies
1.4k
views
News:
Final List of Deprecated Packages for Bioc3.7
deprecate
package
release
News
written 6.8 years ago by
shepherl
4.1k
10
votes
2
replies
1.1k
views
News:
SUPPORT SITE UPGRADE COMPLETE
SupportSite
updated 4.2 years ago by
Steve Lianoglou
★ 13k • written 4.2 years ago by
shepherl
4.1k
0
votes
5
replies
1.2k
views
News:
EuroBioC2024 abstract submission is open!
Conference
Bioconductor
EuroBioC2024
updated 22 days ago by
Alan Downey
• 0 • written 11 months ago by
Maria Doyle
▴ 90
1
vote
1
reply
2.0k
views
News:
New Master of Science in Quantitative and Computational Biology at University of Trento, Italy
computational biology
bioinformatics
teaching
master
News
updated 8.5 years ago by
Chloe2013025
• 0 • written 8.6 years ago by
enridomenici
▴ 10
0
votes
1
reply
2.3k
views
News:
Bug in ChAMP package champ.SVD() function
champ
methylation
450k
SVD
EPIC
News
8.4 years ago
Yuan Tian
▴ 90
8
votes
10
replies
2.5k
views
News:
Bioconductor 3.2 is released!
news
News
updated 9.3 years ago by
JunLVI
▴ 40 • written 9.3 years ago by
Dan Tenenbaum
★ 8.2k
10
votes
15
replies
3.2k
views
News:
BioC 2017: Where Software and Biology Connect, 26 / 27 - 28 July, Boston, MA
conference
bioc2017
News
7.8 years ago • updated 7.5 years ago
Martin Morgan
25k
3
votes
1
reply
998
views
News:
Service problems noted
bioconductor
updated 3.3 years ago by
shepherl
4.1k • written 3.3 years ago by
Vincent J. Carey, Jr.
6.7k
3
votes
1
reply
1.3k
views
News:
Bioconductor Mendeley Group
bioconductor
publication
News
updated 8.3 years ago by
taniaak062
• 0 • written 8.4 years ago by
Sean Davis
21k
5
votes
1
reply
3.6k
views
News:
Bioconductor-related papers -- special F1000Research collection for Bioc2016
publication
workflows
benchmark
teaching
News
updated 8.8 years ago by
thomas.ingraham
▴ 10 • written 8.8 years ago by
Wolfgang Huber
★ 13k
9
votes
7
replies
3.3k
views
News:
Conference: BioC 2016: Where Software and Biology Connect, Stanford, 24-26 June
BioC2016
Conference
News
updated 8.5 years ago by
shepherl
4.1k • written 9.0 years ago by
Martin Morgan
25k
5
votes
2
replies
1.6k
views
News:
BioC2019 talk/workshop/scholarship submission deadline MARCH 15
BioC2019
News
updated 5.9 years ago by
Julie Zhu
★ 4.3k • written 5.9 years ago by
Levi Waldron
★ 1.1k
4
votes
1
reply
4.0k
views
News:
Nominations for Bioconductor Awards!
Bioc2020
Bioconductor
Awards
Recognition
News
4.8 years ago • updated 4.6 years ago
shepherl
4.1k
0
votes
1
reply
988
views
News:
Bioconductor 3.19 Release Schedule
Release
release
Software
10 months ago • updated 9 months ago
shepherl
4.1k
3
votes
5
replies
1.7k
views
News:
sorted the results of function dba.report in DiffBind R package
diffbind
News
updated 6.1 years ago by
Rory Stark
★ 5.2k • written 6.1 years ago by
bioqianyang
• 0
0
votes
1
reply
1.3k
views
News:
Single Package Builder Updates and Testing
packages
review
spb
News
7.1 years ago
shepherl
4.1k
0
votes
1
reply
1.9k
views
News:
Plotly uprading issue in ChAMP package
ChAMP
Epigenetics
plotly
Shiny
GUI
News
8.2 years ago • updated 8.0 years ago
Yuan Tian
▴ 90
0
votes
1
reply
1.4k
views
News:
List of Deprecated Packages for Bioc3.6
deprecate
News
7.4 years ago • updated 7.3 years ago
shepherl
4.1k
5
votes
2
replies
3.0k
views
News:
Ensembl release 81 is out!
human
mouse
GRCh38
biomart
Ensembl
News
updated 9.5 years ago by
Sonali Arora
▴ 390 • written 9.5 years ago by
Thomas Maurel
▴ 800
0
votes
1
reply
1.2k
views
News:
Deadline for devel branch 3.9 to pass R CMD build and R CMD check
release
devel
deadline
freeze
News
5.8 years ago
shepherl
4.1k
13
votes
3
replies
2.6k
views
News:
Bioconductor teaching week
teaching
Carpentries
written 2.4 years ago by
Laurent Gatto
1.6k
0
votes
1
reply
900
views
News:
Bioconductor Scientific or Informatic Technology Advancement Award!
Recognition
Awards
Bioc2022
Bioconductor
written 2.7 years ago by
shepherl
4.1k
4
votes
1
reply
2.0k
views
News:
Advanced R programming course - EMBL Heidelberg, 3-4 April 2017
course
workshop
News
8.0 years ago • updated 7.8 years ago
Laurent Gatto
1.6k
1
vote
2
replies
1000
views
News:
Ensembl 108 has been released!
biomaRt
ensembldb
ensembl
written 2.2 years ago by
Louisse
▴ 10
0
votes
1
reply
461
views
News:
Stop mirror service
metaMSdata
updated 7 months ago by
shepherl
4.1k • written 7 months ago by
khonda
• 0
524 results • Page
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Comment: Problems with oarfish + tximport + swish
by
Michael Love
43k
Great thanks for posting the issue and sticking with it Annaleigh
Comment: Problems with oarfish + tximport + swish
by
brown.annaleigh
• 0
Awesome possum! Update works!! Thank you so much for the help and guidance!
Comment: Postdoctoral Researcher in Spatial Gene Regulatory Networks underlying Stomatal
by
iqratechnology4
• 0
Iqra Technology is IT Solutions and Services Company. We are salesforce and Microsoft partner company. https://iqratechnology.com/
Comment: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
by
James W. MacDonald
67k
> BTW, shouldn't you be using keep.lib.sizes = F and re-do the calcNormFactors() after filtering of the dglst low-expression ENSGs, as Gord…
Comment: Problems with oarfish + tximport + swish
by
Michael Love
43k
Let me see if I can add some code to tximeta to cover this case. I've added an argument `skipRanges` in devel branch which should allow: …
Votes
Answer: Error in download.file for TCGAutils::symbolsToRanges
Answer: Error in download.file for TCGAutils::symbolsToRanges
Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
Answer: Limma Interaction Effect with Covariates
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