Showing: pathwaysreset
8
votes
7
answers
1.9k
views
5 follow
7
answers
reactome.db is not updated?
genesetenrichment pathways reactome.db written 5.0 years ago by Guangchuang Yu1.1k • updated 4.6 years ago by willem.ligtenberg150
2
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0
answers
686
views
5 follow
0
answers
0
votes
2
answers
680
views
2
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globaltest question
pathways probe affy written 13.2 years ago by mike Ad.30 • updated 13.2 years ago by Oosting, J. PATH550
0
votes
2
answers
657
views
2
answers
Filtering gene list prior to statistical testing
pathways written 11.4 years ago by Johan van Heerden40 • updated 11.4 years ago by rgentleman5.5k
1
vote
4
answers
1.5k
views
4
answers
reactome.db: reactome IDs not mapped to pathway names
annotation pathways written 5.0 years ago by Johannes Rainer1.5k • updated 4.6 years ago by willem.ligtenberg150
0
votes
1
answer
574
views
1
answer
GeneSetCollection using EntrezID
annotation pathways gseabase written 10.0 years ago by Javier Pérez Florido840 • updated 10.0 years ago by Martin Morgan ♦♦ 24k
0
votes
1
answer
666
views
1
answer
Regarding KEGGgraph
pathways network process written 9.8 years ago by anupam sinha270 • updated 9.8 years ago by Wolfgang Huber13k
0
votes
2
answers
562
views
2
answers
retrieve genes names after KEGG hypergeometric test
annotation pathways go rat2302 probe affy category written 9.0 years ago by Mike Walter230 • updated 9.0 years ago by Iain Gallagher930
0
votes
1
answer
984
views
1
answer
2
votes
1
answer
815
views
1
answer
Pathview graph with multiple states/samples or time series
pathways graph written 6.1 years ago by Luo Weijun1.5k • updated 21 months ago by atanas.kamburov0
2
votes
1
answer
204
views
1
answer
Help for Research Proposal
pathways bioinformatics drug development written 11 months ago by wajeehaejaz170 • updated 11 months ago by Steve Lianoglou12k
0
votes
2
answers
617
views
2
answers
R: Pathway Information
genetics pathways cancer probe globaltest written 14.4 years ago by John Zhang2.9k • updated 14.4 years ago by Alberto Goldoni360
0
votes
2
answers
748
views
2
answers
extracting interactions between members of the KEGG pathways
pathways infrastructure cancer graph written 13.7 years ago by Jane Fridlyand90 • updated 13.7 years ago by rgentleman5.5k
0
votes
1
answer
821
views
1
answer
KEGG package
pathways written 12.3 years ago by Yihuan Xu130 • updated 12.3 years ago by John Zhang2.9k
0
votes
3
answers
1.1k
views
3
answers
GSEA and Broad gene sets
pathways gseabase written 11.9 years ago by Brian Hare30 • updated 11.9 years ago by Weiwei Shi1.2k
0
votes
1
answer
1.4k
views
1
answer
Help using ENSMUSG ids in GOstats
microarray pathways gostats written 11.5 years ago by John Reid30 • updated 11.5 years ago by rgentleman5.5k
0
votes
1
answer
549
views
1
answer
GO over representation analysis
annotation pathways go organism db0 annbuilder process maanova annotationdbi written 11.2 years ago by Marc Carlson7.2k • updated 11.2 years ago by Kort, Eric220
0
votes
1
answer
481
views
1
answer
Rredland installation difficulties
pathways graph rredland written 10.5 years ago by Paul Shannon1.1k • updated 10.5 years ago by Patrick Aboyoun1.6k
0
votes
1
answer
630
views
1
answer
KEGGgraph: any way to obtain 'outcome' nodes?
pathways kegggraph written 9.9 years ago by Paul Shannon1.1k • updated 9.9 years ago by Fraser Sim270
0
votes
1
answer
719
views
1
answer
KEGG orthology linking (K numbers )?
pathways written 9.3 years ago by Fabian Grammes30 • updated 9.3 years ago by Vincent J. Carey, Jr.6.3k
0
votes
2
answers
988
views
2
answers
GO enrichment and pathways
pathways go written 8.6 years ago by Radhouane Aniba240 • updated 8.6 years ago by Yuan Hao240
0
votes
1
answer
635
views
1
answer
A bug in either KEGG or KEGGSOAP?
pathways keggsoap written 7.8 years ago by Sang Chul Choi230 • updated 7.8 years ago by Marc Carlson7.2k
0
votes
1
answer
1.5k
views
1
answer
Kegg pathways overlay with log fold change values
pathways limma spia written 7.4 years ago by Amit Kumar Kashyap50 • updated 7.4 years ago by alessandro brozzi120
0
votes
1
answer
2.2k
views
1
answer
LogFC query in Limma
pathways convert written 6.8 years ago by Roopa Subbaiaih130 • updated 6.8 years ago by Steve Lianoglou12k
1
vote
2
answers
707
views
2
answers
Metabolomic data analysis with papi / papiHtest() does not work as expected
pathways papi written 6.0 years ago by Guest User12k • updated 6.0 years ago by Aggio, Raphael20
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