Showing: pcareset
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PCA for voom normalized RNAseq data
voom pca written 4.4 years ago by Merienne Nicolas120 • updated 4.4 years ago by Aaron Lun24k
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3
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What does dba.PCA in DiffBind exactly do?
diffbind pca written 3.9 years ago by renanec10 • updated 3.8 years ago by Rory Stark2.8k
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DESeq2 PCA different from Prcomp PCA
deseq2 pca prcomp written 3.4 years ago by tiago21128710 • updated 3.4 years ago by Michael Love25k
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How to find genes causing the high variance of one replicate in the PCA
deseq2 pca variance gene_id written 3.3 years ago by NMostajo10 • updated 3.3 years ago by Michael Love25k
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SVA and proportion of variance explained
sva pca svd explained variance written 2.9 years ago by Mattia10 • updated 2.9 years ago by Jeff Leek560
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661
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pcaExplorer error displaying PCA plot
pca pcaexplorer written 2.8 years ago by swaegers.janne0 • updated 2.8 years ago by Federico Marini120
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pcaGoPromoter PCA plot in R: issue with EntrezID conversion
pca pca plot pcagopromoter written 2.5 years ago by sherman.leung10 • updated 2.5 years ago by James W. MacDonald51k
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5 follow
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What to use: PCA or tSNE dimension reduction in DESeq2 analysis?
rnaseq deseq2 pca tsne written 2.2 years ago by s.w.vanderlaan20 • updated 2.2 years ago by Kushal K Dey10
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identifying the samples on plotPCA
deseq2 pca plotpca written 23 months ago by lirongrossmann40 • updated 23 months ago by Michael Love25k
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856
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PCA from TPM
pca tpm tximport written 23 months ago by tanyabioinfo20
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Error in PCA analysis and with ggbiplot function
bioconductor pca ggbiplot expresiondataset written 4.6 years ago by svlachavas700 • updated 4.6 years ago by James W. MacDonald51k
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3D PCA Plot of RNA-seq Data using plotPCA from within DESeq2
rnaseq deseq2 pca written 4.5 years ago by erin.gill8140 • updated 4.5 years ago by Michael Love25k
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Using PCA for unsupervised clustering of RNA-Seq with DESeq2
rnaseq clustering deseq2 pca written 4.4 years ago by Nick N60 • updated 4.4 years ago by Michael Love25k
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1
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how to get tissue name of cel files?
oligo cel pca written 4.2 years ago by angel.ruvalkba0 • updated 4.2 years ago by Gabriel Nathan Kaufman, Mr60
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biplot diagram of PCA analysis differs from plot of variables
R pca biplot written 4.2 years ago by judit.sessler0 • updated 4.2 years ago by James W. MacDonald51k
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How do I extract the principal components in DESeq2?
deseq2 pca written 4.2 years ago by tj.hu10 • updated 4.2 years ago by Michael Love25k
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2
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1000
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Query about DEXSeq
dexseq batch effect pca written 4.0 years ago by n.deshpande0
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1
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711
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1
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1
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793
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DeSeq help with PCA
deseq2 pca written 3.9 years ago by sunil.mangalam0 • updated 3.9 years ago by Michael Love25k
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1
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PCA from deseq and r function differ
deseq2 pca written 3.8 years ago by tonja.r40 • updated 3.8 years ago by Michael Love25k
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1
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1
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Deseq2 PCA plot customize
deseq2 pca written 3.7 years ago by jarod_v6@libero.it40 • updated 3.7 years ago by Michael Love25k
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