plotma Posts

votes

answers

1.2k

views

answers

[DESeq2] normalization doesn't remove my mean-variance trend

normalization deseq2 plotma meansdplot written 4.0 years ago by aravenscraft • 0

votes

answers

1.8k

views

answers

limma::plotMA displays one sample vs. others

limma plotma written 4.0 years ago by Lisa Cohen • 50 • updated 4.0 years ago by Gordon Smyth ♦ 38k

votes

answers

2.7k

views

answers

PlotMA Filters for DeSEQ2 ; adjusting script

rnaseq deseq deseq2 rna-seq plotma written 3.4 years ago by sjs0282 • 0 • updated 3.4 years ago by Michael Love ♦ 24k

vote

answer

2.6k

views

answer

MA plot in R

R rstudio plotma written 2.2 years ago by g.k • 0

vote

answer

510

views

answer

How to exactly replicate the results from plotMA in DESeq2 ?

deseq2 plotma written 23 months ago by Yvan Wenger • 50

vote

answer

304

views

answer

plotMA (DESeq2) Issue

rnaseq deseq2 plotma logfoldchange written 17 months ago by ap_vc21 • 0 • updated 17 months ago by Michael Love ♦ 24k

vote

answers

228

views

answers

Why does backgroundCorrect with method="none" produce different plots with plotMA()?

agilent background correction plotma single channel written 14 months ago by CantExitVIM • 10 • updated 14 months ago by Gordon Smyth ♦ 38k