Showing: pvaluereset
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Zero pvalues after lfcShrink of DESeq2 package
deseq2 pvalue lfcshrink written 6 months ago by peibo_xu0 • updated 6 months ago by Michael Love25k
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Why the p value and logFC calculated by limma is so small
limma volcanoplot logfc pvalue written 7 months ago by xingxd160 • updated 7 months ago by Gordon Smyth39k
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edgeR DEG glmQLFTest
pvalue glmqlftest written 8 months ago by zhang.jianhai0 • updated 8 months ago by Gordon Smyth39k
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p-values smaller than machine epsilon in DESeq2
deseq2 pvalue written 11 months ago by oscarf0 • updated 11 months ago by Michael Love25k
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5 follow
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Finding DE genes from RNA-seq data
qvalue edger differential gene expression fpkm pvalue written 12 months ago by Harrisonesmith0 • updated 11 months ago by Steve Lianoglou12k
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What doest this p.value distribution mean?
deseq2 pvalue written 16 months ago by chipolino0 • updated 16 months ago by Michael Love25k
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fdrtool corrected p-value histograms look weird
adjusted pvalue pvalue fdrtool written 20 months ago by hele70 • updated 20 months ago by Michael Love25k
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How to control p-value inflation with limma
limma pvalue inflation bacon written 2.6 years ago by stephane.cauchi0 • updated 2.6 years ago by Aaron Lun25k
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adjusted p-values and p-values problems!
R rna-seq adjusted pvalue pvalue bonferroni written 3.0 years ago by fromhj30410 • updated 3.0 years ago by Michael Love25k
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ResrtingTools include pvalue NA
reportingtools deseq2 na pvalue written 3.3 years ago by NMostajo10 • updated 3.3 years ago by Michael Love25k
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ReportingTools include pvalue NA and comparissons
reportingtools deseq2 R pvalue coef written 3.4 years ago by NMostajo10 • updated 3.4 years ago by Michael Love25k
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Very low EdgeR Pvalues with very small sample size
edger sample size pvalue written 3.4 years ago by Venu Pullabhatla40 • updated 3.4 years ago by Aaron Lun25k
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Does limma calculate pvalues using log2 fold changes or with linear values?
limma log2 pvalue log2fc written 3.6 years ago by serpalma.v60 • updated 3.6 years ago by Aaron Lun25k
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t-statistic cutoff for finding DMRs with bsseq
bsseq pvalue dmr ttest written 3.7 years ago by enricoferrero570 • updated 3.7 years ago by James W. MacDonald51k
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confusing output from EdgeR Glm
edger logfc pvalue written 4.1 years ago by amoltej10 • updated 4.1 years ago by Aaron Lun25k
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