Showing: pvaluereset
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t-statistic cutoff for finding DMRs with bsseq
bsseq pvalue dmr ttest written 3.2 years ago by enricoferrero570 • updated 3.2 years ago by James W. MacDonald49k
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Does limma calculate pvalues using log2 fold changes or with linear values?
limma log2 pvalue log2fc written 3.1 years ago by serpalma.v40 • updated 3.1 years ago by Aaron Lun23k
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How to control p-value inflation with limma
limma pvalue inflation bacon written 2.1 years ago by stephane.cauchi0 • updated 2.1 years ago by Aaron Lun23k
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Finding DE genes from RNA-seq data
qvalue edger differential gene expression fpkm pvalue written 6 months ago by Harrisonesmith0 • updated 6 months ago by Steve Lianoglou12k
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confusing output from EdgeR Glm
edger logfc pvalue written 3.6 years ago by amoltej10 • updated 3.6 years ago by Aaron Lun23k
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Very low EdgeR Pvalues with very small sample size
edger sample size pvalue written 2.9 years ago by Venu Pullabhatla40 • updated 2.9 years ago by Aaron Lun23k
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ReportingTools include pvalue NA and comparissons
reportingtools deseq2 R pvalue coef written 2.9 years ago by NMostajo10 • updated 2.9 years ago by Michael Love23k
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ResrtingTools include pvalue NA
reportingtools deseq2 na pvalue written 2.8 years ago by NMostajo10 • updated 2.8 years ago by Michael Love23k
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adjusted p-values and p-values problems!
R rna-seq adjusted pvalue pvalue bonferroni written 2.6 years ago by fromhj30410 • updated 2.6 years ago by Michael Love23k
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What doest this p.value distribution mean?
deseq2 pvalue written 10 months ago by g.e.novakovsky0 • updated 10 months ago by Michael Love23k
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p-values smaller than machine epsilon in DESeq2
deseq2 pvalue written 5 months ago by oscarf0 • updated 5 months ago by Michael Love23k
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edgeR DEG glmQLFTest
pvalue glmqlftest written 12 weeks ago by zhang.jianhai0 • updated 12 weeks ago by Gordon Smyth37k
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Why the p value and logFC calculated by limma is so small
limma volcanoplot logfc pvalue written 6 weeks ago by xingxd160 • updated 6 weeks ago by Gordon Smyth37k
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Zero pvalues after lfcShrink of DESeq2 package
deseq2 pvalue lfcshrink written 26 days ago by peibo_xu0 • updated 26 days ago by Michael Love23k
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fdrtool corrected p-value histograms look weird
adjusted pvalue pvalue fdrtool written 14 months ago by hele70 • updated 14 months ago by Michael Love23k
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