1
vote
5
answers
4.0k
views
5
answers
1
vote
3
answers
874
views
3
answers
strange FDR distribution for RNA-seq sample with edgeR
edger rna-seq fdr written 3.2 years ago by OLIVER, DAVID10 • updated 3.2 years ago by Gordon Smyth32k
3
votes
3
answers
3.6k
views
3
answers
1
vote
3
answers
389
views
3
answers
Gene Ontology and Gene Set Enrichment
go gene ontology bioinformatics rna-seq gene set enrichment written 16 months ago by fromhj30410 • updated 16 months ago by Guangchuang Yu890
3
votes
3
answers
313
views
3
answers
40
votes
3
answers
1.4k
views
3
answers
0
votes
2
answers
431
views
2
answers
0
votes
2
answers
594
views
2
answers
1
vote
2
answers
1.7k
views
2
answers
18
votes
2
answers
1.2k
views
2
answers
3
votes
2
answers
1.5k
views
2
answers
edgeR: Error in taglist[[i]] : subscript out of bounds
edger rna-seq written 2.7 years ago by Nick N60 • updated 2.6 years ago by Gordon Smyth32k
6
votes
2
answers
2.1k
views
2
answers
Multi factor design edgeR/Deseq2
edger deseq2 rna-seq written 2.6 years ago by gthm10 • updated 2.6 years ago by Gordon Smyth32k
5
votes
2
answers
653
views
2
answers
Understanding edgeR coefficients and design
edger rna-seq r edger de written 2.6 years ago by gthm10 • updated 2.6 years ago by Gordon Smyth32k
3
votes
2
answers
658
views
2
answers
4
votes
2
answers
765
views
2
answers
Quality control on RNA-Seq (level 3) data from TCGA
qualitycontrol rna-seq gc-content written 2.3 years ago by NS10 • updated 2.3 years ago by Matthew McCormack160
0
votes
2
answers
1.0k
views
2
answers
0
votes
2
answers
915
views
2
answers
12
votes
2
answers
4.4k
views
5 follow
2
answers
0
votes
2
answers
781
views
2
answers
WGCNA - problems picking a suitable power
wgcna rna-seq picksoftthreshold power written 2.0 years ago by mrodrigues.fernanda10 • updated 2.0 years ago by Peter Langfelder1.4k
2
votes
2
answers
507
views
2
answers
0
votes
2
answers
1.1k
views
2
answers
PlotMA Filters for DeSEQ2 ; adjusting script
rnaseq deseq deseq2 rna-seq plotma written 23 months ago by sjs02820 • updated 23 months ago by Michael Love16k
3
votes
2
answers
341
views
2
answers
5
votes
2
answers
473
views
2
answers
Co-expression between host and pathogen genes
edger rna-seq written 22 months ago by jhj8910 • updated 22 months ago by Aaron Lun18k
9
votes
2
answers
1.7k
views
2
answers
6
votes
2
answers
696
views
2
answers
Is Limma's removeBatchEffect() and log2() commutative?
limma rna-seq removebatcheffect() written 22 months ago by Ekarl210 • updated 4 weeks ago by alakatos80
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