1
vote
0
answers
101
views
0
answers
2
votes
2
answers
115
views
2
answers
0
votes
0
answers
67
views
0
answers
0
votes
0
answers
61
views
0
answers
0
votes
0
answers
86
views
0
answers
0
votes
1
answer
78
views
1
answer
2
votes
1
answer
147
views
1
answer
The calculation of regularized logarithm
rnaseq deseq2 written 3 months ago by Yuya Liang0 • updated 3 months ago by Michael Love19k
0
votes
1
answer
71
views
1
answer
Interactions and contrasts for DE analysis in ballgown
rnaseq R interactions de ballgown written 3 months ago by khill330 • updated 3 months ago by James W. MacDonald47k
0
votes
0
answers
78
views
0
answers
0
votes
0
answers
90
views
0
answers
2
votes
1
answer
94
views
1
answer
Compare effect size of gene (lfcShrink or not)
rnaseq deseq2 written 3 months ago by Yuya Liang0 • updated 3 months ago by Michael Love19k
7
votes
2
answers
214
views
2
answers
Differentially expressed genes selection with FC and FDR cutoff
rnaseq edger R bioconductor written 3 months ago by Beginner50 • updated 3 months ago by Gordon Smyth35k
1
vote
1
answer
106
views
1
answer
0
votes
1
answer
97
views
1
answer
4
votes
1
answer
152
views
1
answer
0
votes
0
answers
89
views
0
answers
2
votes
1
answer
187
views
1
answer
ASE using DESeq2
rnaseq normalization deseq deseq2 allele specific expression written 3 months ago by c.martinezruiz0 • updated 3 months ago by Simon Anders3.5k
1
vote
1
answer
180
views
1
answer
DESeq2 with CIBERSORT cell proportions?
rnaseq deseq2 written 3 months ago by cartalop0 • updated 3 months ago by Michael Love19k
6
votes
2
answers
202
views
2
answers
scaling data for clustering heat map
rnaseq clustering edger differential gene expression heatmap written 3 months ago by Beginner50 • updated 3 months ago by Gordon Smyth35k
2
votes
1
answer
352
views
1
answer
DESeq2 : normalized counts
rnaseq deseq2 normalized counts written 3 months ago by JoannaF0 • updated 3 months ago by Michael Love19k
1
vote
2
answers
271
views
2
answers
1
vote
1
answer
125
views
1
answer
0
votes
0
answers
76
views
0
answers
5
votes
2
answers
217
views
2
answers
Why DESeq2 and edgeR give different results?
rnaseq edger deseq2 differential gene expression written 3 months ago by Biologist70 • updated 3 months ago by Gordon Smyth35k
2
votes
2
answers
151
views
2
answers
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