1
vote
1
answer
73
views
1
answer
DESeq2 for differential gene expression on GTEx dataset
rnaseq deseq2 gtex written 4 days ago by vikram0 • updated 3 days ago by Michael Love15k
3
votes
1
answer
144
views
1
answer
0
votes
1
answer
122
views
1
answer
0
votes
1
answer
100
views
1
answer
DESeq2 different versions
rnaseq deseq2 R written 10 days ago by minie0 • updated 10 days ago by Michael Love15k
4
votes
3
answers
114
views
3
answers
1
vote
1
answer
133
views
1
answer
Strange distribution of logFC
rnaseq edger deseq2 differential gene expression written 11 days ago by Claire0 • updated 10 days ago by Aaron Lun17k
3
votes
1
answer
120
views
1
answer
DESeq2 biais when genes are missing from the annotation?
rnaseq deseq2 written 11 days ago by corend0 • updated 10 days ago by Michael Love15k
0
votes
1
answer
134
views
1
answer
1
vote
1
answer
122
views
1
answer
0
votes
1
answer
95
views
1
answer
Design of 'group' object in DGElist function
rnaseq dgelist group egder written 19 days ago by fawazfebin0 • updated 19 days ago by Aaron Lun17k
0
votes
1
answer
174
views
1
answer
2
votes
1
answer
130
views
1
answer
0
votes
1
answer
121
views
1
answer
3
votes
2
answers
130
views
2
answers
DESeq2 dispersion and p-value histograms
rnaseq deseq2 dispersion fdrtool written 27 days ago by rrcutler30 • updated 24 days ago by Bernd Klaus470
3
votes
1
answer
88
views
1
answer
3
votes
1
answer
89
views
1
answer
Explainnation of featureCounts in-built annotation?
rnaseq annotation featurecounts written 28 days ago by Claire0 • updated 25 days ago by Wei Shi2.7k
0
votes
1
answer
72
views
1
answer
Deseq2 group comparison
rnaseq deseq2 written 29 days ago by Hari0 • updated 27 days ago by Michael Love15k
0
votes
1
answer
80
views
1
answer
Running model separately for each cell line or as the same model?
rnaseq limma edger deseq2 written 29 days ago by Ahdee40 • updated 29 days ago by k.vitting.seerup10
2
votes
1
answer
69
views
1
answer
Is my design appropriate for contrast in DESeq2?
rnaseq deseq2 design and contrast matrix written 4 weeks ago by dbouzo0 • updated 4 weeks ago by Gavin Kelly510
2
votes
1
answer
115
views
1
answer
0
votes
1
answer
81
views
1
answer
Log2 fold change value in DESeq2
rnaseq deseq2 written 4 weeks ago by ambika.pokhrel530 • updated 4 weeks ago by Michael Love15k
2
votes
1
answer
77
views
1
answer
Deseq2: padj value changes with varying alpha
rnaseq deseq2 counts written 4 weeks ago by yoursbassanio0 • updated 4 weeks ago by Michael Love15k
0
votes
1
answer
96
views
1
answer
6
votes
2
answers
147
views
2
answers
4
votes
1
answer
135
views
1
answer
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