5
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1
answer
696
views
9 follow
1
answer
22
votes
3
answers
1.1k
views
8 follow
3
answers
8
votes
3
answers
4.3k
views
7 follow
3
answers
Batch correction in DESeq2
rnaseq deseq2 combat removebatcheffect() batch effect written 23 months ago by AB0 • updated 17 months ago by adam0
11
votes
1
answer
411
views
7 follow
1
answer
How to remove more than two batches in my data-sets
rnaseq limma removebatcheffect() written 16 months ago by yi.huang30 • updated 16 months ago by Gordon Smyth32k
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votes
2
answers
697
views
6 follow
2
answers
11
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4
answers
761
views
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4
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11
votes
1
answer
487
views
6 follow
1
answer
18
votes
2
answers
2.6k
views
6 follow
2
answers
Usability of ERCC spike-ins in standard RNAseq experiments
rnaseq deseq2 ercc written 13 months ago by mbeckste20 • updated 13 months ago by Simon Anders3.4k
8
votes
2
answers
194
views
6 follow
2
answers
0
votes
1
answer
1.9k
views
5 follow
1
answer
limma-voom
rnaseq normalization limma edger written 3.8 years ago by Ming Yi340 • updated 3.8 years ago by Gordon Smyth32k
1
vote
1
answer
943
views
5 follow
1
answer
edgeR - paired samples with multifactorial design - errors
rnaseq written 3.6 years ago by Guest User12k • updated 3.6 years ago by Devon Ryan200
20
votes
2
answers
7.4k
views
5 follow
2
answers
3
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2
answers
1.3k
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2
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10
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1
answer
1.6k
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5 follow
1
answer
9
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0
answers
2.3k
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5 follow
0
answers
12
votes
3
answers
691
views
5 follow
3
answers
0
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1
answer
582
views
5 follow
1
answer
Normalisation of RNA seq data
rnaseq normalization R bioconductor written 21 months ago by Fiona70 • updated 21 months ago by chris86340
7
votes
1
answer
689
views
5 follow
1
answer
6
votes
1
answer
300
views
5 follow
1
answer
How to deal with these data with DESeq2 ?? In hurry!
rnaseq normalization deseq2 written 14 months ago by alanzxr0 • updated 14 months ago by Michael Love15k
9
votes
2
answers
1.3k
views
5 follow
2
answers
What to use: PCA or tSNE dimension reduction in DESeq2 analysis?
rnaseq deseq2 pca tsne written 4 months ago by s.w.vanderlaan20 • updated 4 months ago by Kushal K Dey10
0
votes
1
answer
335
views
1
answer
Single nucleotide based RNAseq normalization with edgeR
sequencing rnaseq normalization edger written 6.8 years ago by Gordon Smyth32k • updated 6.8 years ago by Jens Georg20
0
votes
2
answers
580
views
2
answers
RNAseq machine learning classifier
rnaseq microarray written 4.4 years ago by Michael Breen350 • updated 4.4 years ago by jhua@tgen.org60
10
votes
4
answers
2.2k
views
4
answers
EdgeR Differential Expression analysis with NAs
rnaseq edger na written 3.2 years ago by elliott770 • updated 3.2 years ago by Aaron Lun17k
5
votes
2
answers
2.0k
views
2
answers
1
vote
1
answer
1.1k
views
1
answer
Error with featureCounts
rnaseq rsubread featurecounts written 2.8 years ago by syrttgump20 • updated 2.8 years ago by Yang Liao20
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