7
votes
1
answer
2.3k
views
14 follow
1
answer
12
votes
3
answers
10k
views
9 follow
3
answers
Batch correction in DESeq2
rnaseq deseq2 combat removebatcheffect() batch effect written 3.0 years ago by AB30 • updated 2.5 years ago by adam0
24
votes
3
answers
2.9k
views
9 follow
3
answers
1
vote
1
answer
3.0k
views
7 follow
1
answer
limma-voom
rnaseq normalization limma edger written 4.9 years ago by Ming Yi350 • updated 4.9 years ago by Gordon Smyth35k
12
votes
1
answer
833
views
7 follow
1
answer
11
votes
1
answer
629
views
7 follow
1
answer
How to remove more than two batches in my data-sets
rnaseq limma removebatcheffect() written 2.4 years ago by yi.huang30 • updated 2.4 years ago by Gordon Smyth35k
19
votes
2
answers
4.3k
views
7 follow
2
answers
Usability of ERCC spike-ins in standard RNAseq experiments
rnaseq deseq2 ercc written 2.2 years ago by mbeckste20 • updated 2.2 years ago by Simon Anders3.5k
8
votes
2
answers
884
views
7 follow
2
answers
0
votes
2
answers
1.0k
views
6 follow
2
answers
4
votes
0
answers
2.1k
views
6 follow
0
answers
11
votes
4
answers
1.4k
views
6 follow
4
answers
18
votes
2
answers
4.4k
views
6 follow
2
answers
7
votes
1
answer
1.0k
views
6 follow
1
answer
1
vote
1
answer
1.2k
views
5 follow
1
answer
edgeR - paired samples with multifactorial design - errors
rnaseq written 4.6 years ago by Guest User12k • updated 4.6 years ago by Devon Ryan200
20
votes
2
answers
10k
views
5 follow
2
answers
3
votes
2
answers
1.8k
views
5 follow
2
answers
9
votes
3
answers
2.7k
views
5 follow
3
answers
5
votes
1
answer
4.7k
views
5 follow
1
answer
Ballgown vs (voom,edgeR,DESeq,limma)
rnaseq limma differential expression voom written 3.9 years ago by Fran├žois Lefebvre50 • updated 3.9 years ago by Alyssa Frazee200
2
votes
2
answers
7.7k
views
5 follow
2
answers
Integrating DESeq2 and TopGO for Enrichment
rnaseq go deseq2 R written 3.8 years ago by nw32810 • updated 3.8 years ago by Bernd Klaus520
3
votes
1
answer
1.9k
views
5 follow
1
answer
Error with featureCounts
rnaseq rsubread featurecounts written 3.8 years ago by syrttgump20 • updated 3.8 years ago by Yang Liao90
10
votes
1
answer
2.2k
views
5 follow
1
answer
Bootstrap confidence intervals on RNA-seq expression from Kallisto
rnaseq limma edger deseq2 voom written 3.5 years ago by Sean Davis21k • updated 14 months ago by Paul Harrison60
9
votes
0
answers
3.0k
views
5 follow
0
answers
12
votes
3
answers
1.2k
views
5 follow
3
answers
12
votes
2
answers
7.2k
views
5 follow
2
answers
gene dispersion, what does it mean?
rnaseq gener written 3.0 years ago by tonja.r40 • updated 3.0 years ago by Gordon Smyth35k
0
votes
1
answer
846
views
5 follow
1
answer
Normalisation of RNA seq data
rnaseq normalization R bioconductor written 2.8 years ago by Fiona70 • updated 2.8 years ago by chris86380
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