24
votes
3
answers
1.4k
views
9 follow
3
answers
5
votes
1
answer
987
views
9 follow
1
answer
10
votes
3
answers
5.5k
views
7 follow
3
answers
Batch correction in DESeq2
rnaseq deseq2 combat removebatcheffect() batch effect written 2.2 years ago by AB0 • updated 21 months ago by adam0
12
votes
1
answer
577
views
7 follow
1
answer
11
votes
1
answer
456
views
7 follow
1
answer
How to remove more than two batches in my data-sets
rnaseq limma removebatcheffect() written 19 months ago by yi.huang30 • updated 19 months ago by Gordon Smyth32k
0
votes
2
answers
748
views
6 follow
2
answers
4
votes
0
answers
1.7k
views
6 follow
0
answers
11
votes
4
answers
884
views
6 follow
4
answers
18
votes
2
answers
2.9k
views
6 follow
2
answers
Usability of ERCC spike-ins in standard RNAseq experiments
rnaseq deseq2 ercc written 16 months ago by mbeckste20 • updated 16 months ago by Simon Anders3.4k
7
votes
1
answer
592
views
6 follow
1
answer
8
votes
2
answers
317
views
6 follow
2
answers
0
votes
1
answer
2.1k
views
5 follow
1
answer
limma-voom
rnaseq normalization limma edger written 4.1 years ago by Ming Yi340 • updated 4.1 years ago by Gordon Smyth32k
1
vote
1
answer
1.0k
views
5 follow
1
answer
edgeR - paired samples with multifactorial design - errors
rnaseq written 3.8 years ago by Guest User12k • updated 3.8 years ago by Devon Ryan200
20
votes
2
answers
8.0k
views
5 follow
2
answers
3
votes
2
answers
1.4k
views
5 follow
2
answers
10
votes
1
answer
1.8k
views
5 follow
1
answer
Bootstrap confidence intervals on RNA-seq expression from Kallisto
rnaseq limma edger deseq2 voom written 2.7 years ago by Sean Davis21k • updated 5 months ago by Paul Harrison60
9
votes
0
answers
2.5k
views
5 follow
0
answers
12
votes
3
answers
830
views
5 follow
3
answers
0
votes
1
answer
651
views
5 follow
1
answer
Normalisation of RNA seq data
rnaseq normalization R bioconductor written 2.0 years ago by Fiona70 • updated 24 months ago by chris86360
7
votes
1
answer
832
views
5 follow
1
answer
6
votes
1
answer
341
views
5 follow
1
answer
How to deal with these data with DESeq2 ?? In hurry!
rnaseq normalization deseq2 written 17 months ago by alanzxr0 • updated 17 months ago by Michael Love16k
9
votes
2
answers
1.8k
views
5 follow
2
answers
What to use: PCA or tSNE dimension reduction in DESeq2 analysis?
rnaseq deseq2 pca tsne written 8 months ago by s.w.vanderlaan20 • updated 7 months ago by Kushal K Dey10
2
votes
0
answers
190
views
5 follow
0
answers
0
votes
1
answer
376
views
1
answer
Single nucleotide based RNAseq normalization with edgeR
sequencing rnaseq normalization edger written 7.1 years ago by Gordon Smyth32k • updated 7.1 years ago by Jens Georg20
0
votes
2
answers
649
views
2
answers
RNAseq machine learning classifier
rnaseq microarray written 4.6 years ago by Michael Breen350 • updated 4.6 years ago by jhua@tgen.org60
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