1
vote
1
answer
70
views
1
answer
0
votes
1
answer
29
views
1
answer
DESeq2 for differential gene expression on GTEx dataset
rnaseq deseq2 gtex written 4 hours ago by vikram0 • updated 3 hours ago by Michael Love14k
4
votes
3
answers
464
views
3
answers
Choosing a threshold for minimum counts in RNAseq
rnaseq deseq2 written 17 months ago by laianavarromartin10 • updated 5 days ago by Michael Love14k
0
votes
1
answer
118
views
1
answer
4
votes
3
answers
108
views
3
answers
3
votes
1
answer
113
views
1
answer
DESeq2 biais when genes are missing from the annotation?
rnaseq deseq2 written 7 days ago by corend0 • updated 6 days ago by Michael Love14k
0
votes
1
answer
92
views
1
answer
DESeq2 different versions
rnaseq deseq2 R written 6 days ago by minie0 • updated 6 days ago by Michael Love14k
1
vote
1
answer
129
views
1
answer
Strange distribution of logFC
rnaseq edger deseq2 differential gene expression written 7 days ago by Claire0 • updated 6 days ago by Aaron Lun17k
0
votes
1
answer
401
views
1
answer
1
vote
1
answer
103
views
1
answer
0
votes
1
answer
128
views
1
answer
0
votes
1
answer
93
views
1
answer
Design of 'group' object in DGElist function
rnaseq dgelist group egder written 15 days ago by fawazfebin0 • updated 15 days ago by Aaron Lun17k
4
votes
2
answers
159
views
2
answers
0
votes
1
answer
171
views
1
answer
2
votes
1
answer
126
views
1
answer
0
votes
1
answer
117
views
1
answer
3
votes
2
answers
123
views
2
answers
DESeq2 dispersion and p-value histograms
rnaseq deseq2 dispersion fdrtool written 24 days ago by rrcutler30 • updated 20 days ago by Bernd Klaus470
1
vote
2
answers
315
views
2
answers
Pathview pathview kegg.native=TRUE throws error in img
rnaseq pathview error bioconductor kegg written 8 months ago by guillermo.marco30 • updated 21 days ago by map208510
3
votes
1
answer
82
views
1
answer
Explainnation of featureCounts in-built annotation?
rnaseq annotation featurecounts written 24 days ago by Claire0 • updated 21 days ago by Wei Shi2.7k
2
votes
1
answer
111
views
1
answer
0
votes
1
answer
68
views
1
answer
Deseq2 group comparison
rnaseq deseq2 written 25 days ago by Hari0 • updated 24 days ago by Michael Love14k
3
votes
1
answer
85
views
1
answer
0
votes
1
answer
78
views
1
answer
Running model separately for each cell line or as the same model?
rnaseq limma edger deseq2 written 25 days ago by Ahdee30 • updated 25 days ago by k.vitting.seerup10
2
votes
1
answer
65
views
1
answer
Is my design appropriate for contrast in DESeq2?
rnaseq deseq2 design and contrast matrix written 26 days ago by dbouzo0 • updated 26 days ago by Gavin Kelly510
0
votes
1
answer
77
views
1
answer
Log2 fold change value in DESeq2
rnaseq deseq2 written 27 days ago by ambika.pokhrel530 • updated 27 days ago by Michael Love14k
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