0
votes
4
answers
572
views
4
answers
read coverage per transcript for RNASeq
rnaseq coverage process shortread written 8.5 years ago by Jessica Hunter40 • updated 8.5 years ago by Martin Morgan ♦♦ 21k
0
votes
2
answers
379
views
2
answers
variation between cells compared to samples
rnaseq written 8.0 years ago by Pete Shepard240 • updated 8.0 years ago by Wolfgang Huber13k
0
votes
0
answers
519
views
0
answers
0
votes
0
answers
580
views
0
answers
0
votes
1
answer
697
views
1
answer
analysis of differential expression of small RNAs sequences
rnaseq deseq written 7.9 years ago by Andreia Fonseca810 • updated 7.8 years ago by Simon Anders3.4k
0
votes
0
answers
598
views
0
answers
0
votes
2
answers
484
views
2
answers
EdgeR - problems running estimateCRDisp
rnaseq edger written 7.3 years ago by josquin.tibbits@dpi.vic.gov.au60 • updated 7.3 years ago by Gordon Smyth32k
0
votes
1
answer
474
views
1
answer
0
votes
0
answers
462
views
0
answers
0
votes
1
answer
517
views
1
answer
DESeq: residuals instead of read counts
rnaseq deseq written 7.1 years ago by Tuuli Lappalainen10 • updated 7.1 years ago by Simon Anders3.4k
0
votes
1
answer
670
views
1
answer
plotSmear() function in edgeR
rnaseq edger written 7.1 years ago by Umhang, Martin10 • updated 7.1 years ago by Mark Robinson1.1k
0
votes
1
answer
368
views
1
answer
Single nucleotide based RNAseq normalization with edgeR
sequencing rnaseq normalization edger written 7.0 years ago by Gordon Smyth32k • updated 7.0 years ago by Jens Georg20
0
votes
2
answers
486
views
2
answers
0
votes
0
answers
273
views
0
answers
Questions about package DESeq
rnaseq deseq written 6.8 years ago by Mr.B10
0
votes
0
answers
276
views
0
answers
Informations about DESeq package
rnaseq deseq written 6.8 years ago by Bruno Roman10
0
votes
0
answers
472
views
0
answers
0
votes
3
answers
443
views
3
answers
RNASeq: normalization issues
rnaseq written 6.8 years ago by João Moura160 • updated 6.8 years ago by Wei Shi2.7k
0
votes
3
answers
493
views
3
answers
RNASeq: normalization issues
rnaseq normalization edger written 6.8 years ago by ywchen@jimmy.harvard.edu80 • updated 6.8 years ago by Alicia Oshlack70
0
votes
2
answers
634
views
2
answers
Array data vs. Next Gen with log 2 Fold Change
rnaseq microarray limma written 6.6 years ago by john herbert550 • updated 6.6 years ago by Gordon Smyth32k
0
votes
1
answer
770
views
1
answer
Log2 fold change single replicate RNA seq
rnaseq microarray limma written 6.6 years ago by john herbert550 • updated 6.6 years ago by Marc Carlson7.2k
3
votes
1
answer
1.3k
views
1
answer
Nanostring ncounterdata - DESeq
rnaseq normalization preprocessing deseq written 6.6 years ago by Vanessa Vermeirssen20 • updated 6.6 years ago by Simon Anders3.4k
0
votes
1
answer
585
views
1
answer
0
votes
2
answers
1.4k
views
2
answers
views on Rle using GRanges object
rnaseq coverage go rtracklayer written 6.5 years ago by Janet Young730 • updated 6.5 years ago by Hervé Pagès ♦♦ 13k
0
votes
0
answers
582
views
0
answers
0
votes
1
answer
1.8k
views
1
answer
edgeR: handling missing values with Quantile normalisation
rnaseq edger written 6.5 years ago by Sonika Tyagi20 • updated 6.5 years ago by Paul Leo970
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