9
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0
answers
2.3k
views
5 follow
0
answers
6
votes
0
answers
1.6k
views
0
answers
10
votes
1
answer
1.6k
views
5 follow
1
answer
3
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0
answers
1.6k
views
0
answers
11
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4
answers
761
views
6 follow
4
answers
16
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1
answer
1.6k
views
1
answer
11
votes
1
answer
412
views
7 follow
1
answer
How to remove more than two batches in my data-sets
rnaseq limma removebatcheffect() written 16 months ago by yi.huang30 • updated 16 months ago by Gordon Smyth32k
5
votes
1
answer
699
views
9 follow
1
answer
20
votes
2
answers
7.4k
views
5 follow
2
answers
4
votes
1
answer
449
views
1
answer
stacking (partially or completely overlapping) GRanges/IRanges
rnaseq iranges granges written 2.8 years ago by Johannes Rainer1.1k • updated 2.8 years ago by Martin Morgan ♦♦ 20k
2
votes
2
answers
1.0k
views
2
answers
12
votes
3
answers
692
views
5 follow
3
answers
4
votes
1
answer
812
views
1
answer
11
votes
2
answers
1.3k
views
2
answers
How to map all Ensembl IDs to Gene Symbols- Problem with AnootationDbi
rnaseq annotationdbi written 14 months ago by gokce.ouz20 • updated 13 months ago by Valerie Obenchain ♦♦ 6.4k
18
votes
2
answers
2.6k
views
6 follow
2
answers
Usability of ERCC spike-ins in standard RNAseq experiments
rnaseq deseq2 ercc written 13 months ago by mbeckste20 • updated 13 months ago by Simon Anders3.4k
5
votes
1
answer
797
views
1
answer
What problem does the MA plot diagnose? And how do you solve it?
rnaseq deseq deseq2 written 8 months ago by ysdel30 • updated 8 months ago by Ryan C. Thompson6.1k
3
votes
1
answer
1.2k
views
1
answer
Nanostring ncounterdata - DESeq
rnaseq normalization preprocessing deseq written 6.3 years ago by Vanessa Vermeirssen20 • updated 6.3 years ago by Simon Anders3.4k
2
votes
2
answers
1.3k
views
2
answers
1
vote
5
answers
1.7k
views
5
answers
EdgeR: replicated pools, yes or not?
rnaseq microarray edger written 3.6 years ago by Guest User12k • updated 3.6 years ago by Ryan C. Thompson6.1k
1
vote
1
answer
944
views
5 follow
1
answer
edgeR - paired samples with multifactorial design - errors
rnaseq written 3.6 years ago by Guest User12k • updated 3.6 years ago by Devon Ryan200
3
votes
2
answers
3.5k
views
2
answers
Remove batch effect in small RNASeq study (SVA or others?)
rnaseq alignment edger sva written 3.6 years ago by shirley zhang1.0k • updated 2.8 years ago by Gordon Smyth32k
2
votes
1
answer
2.2k
views
1
answer
readGappedAlignments not working in Rsamtools
rnaseq written 3.4 years ago by Guest User12k • updated 3.4 years ago by Valerie Obenchain ♦♦ 6.4k
1
vote
1
answer
1.1k
views
1
answer
[Help for DESeq]: Error in lfproc - newsplit: out of vertex space
rnaseq written 3.4 years ago by Imène SENINET20 • updated 3.4 years ago by Wolfgang Huber13k
7
votes
1
answer
1.6k
views
1
answer
1
vote
0
answers
359
views
0
answers
GO analysis representation with RamiGO
rnaseq go written 3.1 years ago by Merienne Nicolas120 • updated 3.1 years ago by Laurent Gatto840
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