Showing: rnaseqreset
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Batch correction in DESeq2
rnaseq deseq2 combat removebatcheffect() batch effect written 3.9 years ago by AB70 • updated 3.5 years ago by adam0
11
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How to remove more than two batches in my data-sets
rnaseq limma removebatcheffect() written 3.3 years ago by yi.huang30 • updated 3.3 years ago by Gordon Smyth39k
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edgeR: Using ratios (translational efficiencies) as input
rnaseq edger written 6.6 years ago by gowtham210 • updated 6.6 years ago by Gordon Smyth39k
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limma-voom
rnaseq normalization limma edger written 5.8 years ago by Ming Yi350 • updated 5.8 years ago by Gordon Smyth39k
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questions on edgeR package
rnaseq edger rsubread written 5.8 years ago by Gordon Smyth39k • updated 5.8 years ago by Yi, Ming NIH/NCI [C]100
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edgeR - paired samples with multifactorial design - errors
rnaseq written 5.6 years ago by Guest User12k • updated 5.6 years ago by Devon Ryan200
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edgeR setting up glm/contrasts/ANOVA-like tests
rnaseq edger written 5.1 years ago by ericalarson10 • updated 5.1 years ago by Aaron Lun25k
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5
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Ballgown vs (voom,edgeR,DESeq,limma)
rnaseq limma differential expression voom written 4.8 years ago by Fran├žois Lefebvre50 • updated 4.8 years ago by Alyssa Frazee210
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Integrating DESeq2 and TopGO for Enrichment
rnaseq go deseq2 R written 4.8 years ago by nw32810 • updated 4.8 years ago by Bernd Klaus560
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GLM Likelihood ratio test
rnaseq edger glm written 4.7 years ago by ygowtha0 • updated 4.7 years ago by Gordon Smyth39k
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Bootstrap confidence intervals on RNA-seq expression from Kallisto
rnaseq limma edger deseq2 voom written 4.4 years ago by Sean Davis21k • updated 2.2 years ago by Paul Harrison70
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13
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RPKM, CPM and TMM
rnaseq edger differential expression written 4.4 years ago by Pauly Lin110 • updated 4.4 years ago by Aaron Lun25k
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Joint Preprocessing of RNA-Seq and Microarray datasets
rnaseq microarray preprocessing written 4.0 years ago by Jo10 • updated 4.0 years ago by Gordon Smyth39k
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