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Comment: installation error for BiocNeighbors package
by
育
• 0
omitted error2 ~~~ /home/ikutsu/Tsuchiya_NGS/local/include/c++/13.2.0/bits/new_allocator.h: In instantiation of 'void std::__new_allocat…
Comment: installation error for BiocNeighbors package
by
育
• 0
omitted error1 ~~~ /home/ikutsu/Tsuchiya_NGS/local/bin/g++ -std=gnu++17 -fPIC -std=gnu++17 -I"/home/ikutsu/Tsuchiya_NGS/local/lib64/R/i…
Comment: DESeq2 interaction between cancer cells and microenvironment cells
by
monkeymartgameaz
• 0
This is healthy for you. It is your priorities that matter, not those activities you believe you cannot profit from. It is always wise to a…
Answer: Is it possible to parallelise saveHDF5SummarizedExperiment
by
Hervé Pagès
16k
Hi Stefano, Unfortunately HDF5 doesn't support concurrent writing so parallelising is not an option. A few things that maybe could help: …
Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db?
by
James W. MacDonald
67k
It's a simple two-liner in [getsrc.sh][1] ``` awk -F'\t' 'BEGIN {OFS=FS} {if($3 != $11 && $11 != "-") $3 = $11; print $0}' gene_info > tmp…
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Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db?
Answer: Supercells with Basilisk fails for dtype('float64') to dtype('int64') conversion
A: GOseq analysis with only upregulated or downregulated genes
A: GOseq analysis with only upregulated or downregulated genes
Answer: Properly constructing a hypergeometric test
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