0
votes
1
answer
2.4k
views
5 follow
1
answer
Rsubread package not available? Warning resolved
affxparser rsubread biocinstaller written 7.0 years ago by NDowell20 • updated 7.0 years ago by Wei Shi2.9k
3
votes
1
answer
1.9k
views
5 follow
1
answer
Error with featureCounts
rnaseq rsubread featurecounts written 3.8 years ago by syrttgump20 • updated 3.8 years ago by Yang Liao90
3
votes
2
answers
1.8k
views
5 follow
2
answers
Run featureCounts in isoform/transcript level in Rsubread
rsubread written 2.8 years ago by Likai Mao10 • updated 2.8 years ago by Wei Shi2.9k
1
vote
1
answer
950
views
1
answer
questions on edgeR package
rnaseq edger rsubread written 4.9 years ago by Gordon Smyth35k • updated 4.9 years ago by Yi, Ming NIH/NCI [C]100
6
votes
3
answers
966
views
3
answers
Possible bug in Rsubread Phred-Score read
alignment rsubread bug written 4.1 years ago by caufeminecraft20 • updated 4.1 years ago by Wei Shi2.9k
7
votes
2
answers
3.8k
views
2
answers
4
votes
2
answers
1.8k
views
2
answers
3
votes
1
answer
1.7k
views
1
answer
1
vote
0
answers
543
views
0
answers
Error using Rsubread align: caugh segfault invalid permissions
rsubread segfault align written 2.6 years ago by gerard_llimos10 • updated 2.6 years ago by Wei Shi2.9k
9
votes
3
answers
378
views
3
answers
6
votes
1
answer
6.8k
views
1
answer
featureCount - very less Successfully assigned reads
rsubread featurecounts written 4.0 years ago by amoltej10 • updated 4.0 years ago by James W. MacDonald48k
3
votes
3
answers
2.1k
views
3
answers
1
vote
2
answers
1.7k
views
2
answers
rsubread featurecounts returns 0% successfully assigned reads
rsubread written 3.9 years ago by ross.chapman10 • updated 3.4 years ago by amoltej10
5
votes
6
answers
1.4k
views
6
answers
Rsubread::featureCounts extremely slow on some annotations
rsubread featurecounts written 3.8 years ago by Ryan C. Thompson7.1k • updated 3.5 years ago by Wei Shi2.9k
0
votes
1
answer
844
views
1
answer
Rsubread, featureCounts misses some exons
annotation rsubread featurecounts written 3.3 years ago by tonja.r40 • updated 3.3 years ago by Gordon Smyth35k
2
votes
1
answer
531
views
1
answer
reporting multi-mapping locations in Subread-align
rsubread subread written 2.9 years ago by Vivek.b90 • updated 2.9 years ago by Wei Shi2.9k
3
votes
1
answer
624
views
1
answer
1
vote
9
answers
974
views
9
answers
3
votes
2
answers
497
views
2
answers
0
votes
1
answer
906
views
1
answer
Installing problem Bioconductor
rsubread written 2.2 years ago by tran_tim10 • updated 2.2 years ago by Martin Morgan ♦♦ 22k
4
votes
1
answer
1.2k
views
1
answer
Rsubread featureCounts with strand information
rnaseq rsubread bam written 24 months ago by rubi90 • updated 23 months ago by Aaron Lun21k
0
votes
3
answers
515
views
3
answers
1
vote
1
answer
423
views
1
answer
Rsubread install problems on CentOS 6.8/R3.4.1/gcc/4.8.2
rsubread linux installation written 17 months ago by hjmangalam0 • updated 17 months ago by Mike Smith3.1k
4
votes
1
answer
768
views
1
answer
Rsubread counting peaks ATACseq
rsubread narrowpeaks featurecounts atac-seq written 13 months ago by j.bergenstrahle80 • updated 13 months ago by Wei Shi2.9k
4
votes
2
answers
145
views
2
answers
convert featureCounts's gene ID to entrez gene id
biomart rsubread gencode written 7 weeks ago by YinCY0 • updated 7 weeks ago by James W. MacDonald48k
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