0
votes
1
answer
1.4k
views
5 follow
1
answer
Rsubread package not available? Warning resolved
affxparser rsubread biocinstaller written 6.0 years ago by NDowell20 • updated 6.0 years ago by Wei Shi2.7k
3
votes
2
answers
719
views
5 follow
2
answers
Run featureCounts in isoform/transcript level in Rsubread
rsubread written 21 months ago by Likai Mao10 • updated 21 months ago by Wei Shi2.7k
6
votes
3
answers
718
views
3
answers
Possible bug in Rsubread Phred-Score read
alignment rsubread bug written 3.0 years ago by caufeminecraft20 • updated 3.0 years ago by Wei Shi2.7k
1
vote
1
answer
1.1k
views
1
answer
Error with featureCounts
rnaseq rsubread featurecounts written 2.8 years ago by syrttgump20 • updated 2.8 years ago by Yang Liao20
7
votes
2
answers
2.5k
views
2
answers
4
votes
2
answers
1.1k
views
2
answers
3
votes
1
answer
1.0k
views
1
answer
1
vote
0
answers
345
views
0
answers
Error using Rsubread align: caugh segfault invalid permissions
rsubread segfault align written 18 months ago by gerard_llimos10 • updated 18 months ago by Wei Shi2.7k
5
votes
1
answer
4.6k
views
1
answer
featureCount - very less Successfully assigned reads
rsubread featurecounts written 2.9 years ago by amoltej10 • updated 2.9 years ago by James W. MacDonald45k
1
vote
3
answers
1.3k
views
3
answers
1
vote
2
answers
1.1k
views
2
answers
rsubread featurecounts returns 0% successfully assigned reads
rsubread written 2.8 years ago by ross.chapman10 • updated 2.3 years ago by amoltej10
5
votes
6
answers
964
views
6
answers
Rsubread::featureCounts extremely slow on some annotations
rsubread featurecounts written 2.7 years ago by Ryan C. Thompson6.1k • updated 2.4 years ago by Wei Shi2.7k
0
votes
1
answer
606
views
1
answer
Rsubread, featureCounts misses some exons
annotation rsubread featurecounts written 2.2 years ago by tonja.r40 • updated 2.2 years ago by Gordon Smyth32k
2
votes
1
answer
355
views
1
answer
reporting multi-mapping locations in Subread-align
rsubread subread written 22 months ago by Vivek.b40 • updated 22 months ago by Wei Shi2.7k
3
votes
1
answer
420
views
1
answer
1
vote
9
answers
585
views
9
answers
3
votes
2
answers
296
views
2
answers
0
votes
1
answer
521
views
1
answer
Installing problem Bioconductor
rsubread written 13 months ago by tran_tim10 • updated 13 months ago by Martin Morgan ♦♦ 20k
0
votes
3
answers
327
views
3
answers
1
vote
1
answer
150
views
1
answer
Rsubread install problems on CentOS 6.8/R3.4.1/gcc/4.8.2
rsubread linux installation written 4 months ago by hjmangalam0 • updated 4 months ago by Mike Smith2.1k
4
votes
1
answer
93
views
1
answer
Rsubread counting peaks ATACseq
rsubread narrowpeaks featurecounts atac-seq written 6 days ago by j.bergenstrahle70 • updated 6 days ago by Wei Shi2.7k
0
votes
1
answer
683
views
1
answer
questions on edgeR package
rnaseq edger rsubread written 3.8 years ago by Gordon Smyth32k • updated 3.8 years ago by Yi, Ming NIH/NCI [C]100
4
votes
3
answers
1.3k
views
3
answers
9
votes
2
answers
1.1k
views
2
answers
1
vote
3
answers
613
views
3
answers
Error using RSubread to buildIndex with large Fasta
rsubread written 2.7 years ago by beiting30 • updated 2.7 years ago by Wei Shi2.7k
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