2
votes
1
answer
80
views
1
answer
2
votes
2
answers
106
views
2
answers
0
votes
1
answer
103
views
1
answer
1
vote
1
answer
91
views
1
answer
Controlling for batch after Salmon-Tximport
deseq2 wgcna rna-seq salmon written 9 weeks ago by mad6kj0 • updated 9 weeks ago by James W. MacDonald46k
0
votes
1
answer
78
views
1
answer
1
vote
1
answer
542
views
1
answer
tximport using for data generated from other tools
salmon tximport express written 13 months ago by saumya.kumar0 • updated 10 weeks ago by Michael Love18k
1
vote
1
answer
138
views
1
answer
processing of (salmon) gene counts for eqtl analysis
tmm salmon gene length tximport eqtl written 12 weeks ago by VSM120 • updated 12 weeks ago by Michael Love18k
0
votes
1
answer
99
views
1
answer
tximport error with Salmon in DESeq2 pipeline
deseq2 salmon tximport written 4 months ago by seyfim0 • updated 4 months ago by Michael Love18k
0
votes
1
answer
123
views
1
answer
use tximport's countsFromAbundance when using DESeq2
rnaseq normalization deseq2 salmon tximport written 4 months ago by ginlucks0 • updated 4 months ago by Michael Love18k
4
votes
1
answer
461
views
1
answer
5
votes
1
answer
212
views
1
answer
1
vote
1
answer
233
views
1
answer
scater/scran with TPMs from Salmon - counts?
salmon scran scater written 6 months ago by nk0 • updated 6 months ago by Aaron Lun20k
3
votes
0
answers
359
views
0
answers
1
vote
1
answer
258
views
1
answer
0
votes
3
answers
549
views
3
answers
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