Showing: salmonreset
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52
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62
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Normalizing counts using TIN metric before DESeq2
deseq2 salmon tximport written 5 weeks ago by hsbio10 • updated 5 weeks ago by Michael Love25k
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1
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84
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Using duplication rate as a covariate
deseq2 salmon fastp written 6 weeks ago by rbutler0 • updated 6 weeks ago by Michael Love25k
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1
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101
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1
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RNA-seq with Salmon and tximport
rna-seq salmon tximport written 8 weeks ago by woojoy140 • updated 8 weeks ago by James W. MacDonald51k
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96
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3
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252
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119
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Importing Salmon counts with tximport with host and virus genomes
salmon tximport written 4 months ago by rbenel0 • updated 4 months ago by Michael Love25k
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1
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115
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DESeq2 gives weird results
deseq2 salmon written 4 months ago by chipolino0 • updated 4 months ago by Michael Love25k
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200
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1
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1
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196
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dtuScaledTPM vs lengthScaledTPM in DTU analysis
salmon tpm tximport dtu rnaseqdtu written 6 months ago by fiona.dick9110 • updated 6 months ago by Michael Love25k
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171
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3
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1
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163
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quant.sf files and tximport, transcripts not recognized
salmon tximport written 6 months ago by Merlin 10 • updated 6 months ago by Michael Love25k
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1
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181
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1
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1
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248
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Normalisation for count data visualisation only
normalization deseq2 salmon tximport written 7 months ago by Alex So0 • updated 7 months ago by Michael Love25k
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1
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284
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1
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1
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1
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273
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1
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rnaseqDTU log2fold change DEXSeq
dexseq salmon dtu rnaseqdtu foldchange written 9 months ago by fiona.dick9110 • updated 5 months ago by Michael Love25k
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1
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267
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1
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Using Salmon and DESeq2 to compare metagenomic content between samples
deseq2 salmon written 9 months ago by kballa0 • updated 9 months ago by Michael Love25k
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1
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274
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8
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475
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WGCNA following salmon/DESeq2
deseq2 wgcna salmon written 10 months ago by maya.kappil10 • updated 10 months ago by Peter Langfelder2.2k
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181
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DEseq2 with different fastq read numbers after salmon
deseq2 salmon salmon rna seq written 11 months ago by danalvoronov10 • updated 11 months ago by Michael Love25k
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204
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quantifying piRNA and tRNA by Salmon
dge salmon written 11 months ago by lkianmehr0
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238
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2
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389
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2
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2
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419
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0
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519
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