1
vote
6
answers
1.1k
views
6
answers
ShortRead with large fastq files
shortread written 3.5 years ago by danova_fr20
0
votes
2
answers
578
views
2
answers
gcContent error with shortread
shortread written 3.6 years ago by danova_fr20
2
votes
3
answers
753
views
3
answers
5
votes
1
answer
1.2k
views
1
answer
Trimming with ShortRead
shortread written 3.7 years ago by cookie20 • updated 3.7 years ago by Martin Morgan ♦♦ 22k
0
votes
2
answers
535
views
2
answers
ShortRead summary stats
shortread illumina written 3.7 years ago by danova_fr20
0
votes
4
answers
2.8k
views
4
answers
convert fastq file to fasta using shortread package
shortread illumina written 3.7 years ago by kelvinfrog750 • updated 3.7 years ago by Martin Morgan ♦♦ 22k
3
votes
1
answer
1.4k
views
1
answer
fastqSampler and writeFastq in shortread package
shortread fastq write written 3.8 years ago by francesca.defilippis60 • updated 3.8 years ago by Martin Morgan ♦♦ 22k
0
votes
1
answer
1.2k
views
1
answer
ShortRead- how to edit the id in a fastq
shortread written 3.9 years ago by newmanss0 • updated 3.9 years ago by Valerie Obenchain ♦♦ 6.7k
0
votes
2
answers
731
views
2
answers
3
votes
4
answers
900
views
4
answers
0
votes
0
answers
437
views
0
answers
0
votes
1
answer
1.8k
views
1
answer
0
votes
1
answer
737
views
1
answer
Finding my un-counted reads
sequencing rtracklayer shortread genomicranges written 5.3 years ago by Sam McInturf300 • updated 5.3 years ago by Valerie Obenchain ♦♦ 6.7k
0
votes
1
answer
931
views
1
answer
bioc package installation problem
shortread biocinstaller written 5.7 years ago by carol white680 • updated 5.7 years ago by Dan Tenenbaum ♦♦ 8.2k
0
votes
0
answers
502
views
0
answers
0
votes
1
answer
1.0k
views
1
answer
Trouble creating a ShortReadQ object and using writeFastq
preprocessing shortread written 5.8 years ago by Noah Dowell410 • updated 5.8 years ago by Martin Morgan ♦♦ 22k
0
votes
1
answer
1.6k
views
1
answer
readFasta and gzipped FASTA files
shortread written 5.8 years ago by Ivan Gregoretti310 • updated 5.8 years ago by Martin Morgan ♦♦ 22k
0
votes
2
answers
1.1k
views
2
answers
readFastq, writeFastq, compressed files and unix pipes.
shortread written 6.0 years ago by Ivan Gregoretti310 • updated 6.0 years ago by Martin Morgan ♦♦ 22k
0
votes
0
answers
483
views
0
answers
0
votes
0
answers
437
views
0
answers
0
votes
1
answer
592
views
1
answer
FastqSampler sort by ID
shortread written 6.1 years ago by Marcus Davy390 • updated 6.1 years ago by Martin Morgan ♦♦ 22k
0
votes
1
answer
411
views
1
answer
how to get the quality score system information from the reads
shortread written 6.1 years ago by wang peter2.0k • updated 6.1 years ago by Martin Morgan ♦♦ 22k
0
votes
1
answer
645
views
1
answer
0
votes
1
answer
450
views
1
answer
how to plot quality report
shortread written 6.3 years ago by wang peter2.0k • updated 6.3 years ago by Martin Morgan ♦♦ 22k
0
votes
1
answer
403
views
1
answer
ShortRead package
shortread written 6.4 years ago by Fatemehsadat Seyednasrollah260 • updated 6.4 years ago by Martin Morgan ♦♦ 22k
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