0
votes
1
answer
253
views
1
answer
Vignette for ShortRead
shortread written 9.3 years ago by joseph330 • updated 9.3 years ago by Martin Morgan ♦♦ 20k
0
votes
2
answers
335
views
2
answers
Solexa fastq files and BLAT
cancer biostrings shortread written 8.8 years ago by Daniel Brewer1.8k • updated 8.8 years ago by Martin Morgan ♦♦ 20k
0
votes
0
answers
330
views
0
answers
0
votes
1
answer
275
views
1
answer
0
votes
4
answers
502
views
4
answers
read coverage per transcript for RNASeq
rnaseq coverage process shortread written 8.2 years ago by Jessica Hunter40 • updated 8.2 years ago by Martin Morgan ♦♦ 20k
0
votes
2
answers
380
views
2
answers
pileup function in ShortRead package
alignment shortread written 8.1 years ago by Nora Rieber40 • updated 8.1 years ago by Martin Morgan ♦♦ 20k
0
votes
1
answer
310
views
1
answer
possible bug in extendReads() in package chipseq
alignment shortread written 8.0 years ago by Nora Rieber40 • updated 8.0 years ago by Martin Morgan ♦♦ 20k
0
votes
1
answer
303
views
1
answer
ShortRead internal: too many 'snap' entries
shortread written 7.9 years ago by Ramzi TEMANNI150 • updated 7.9 years ago by Martin Morgan ♦♦ 20k
0
votes
1
answer
302
views
1
answer
Shortread and filtering of duplicate reads
shortread written 7.8 years ago by Johannes Waage50 • updated 7.8 years ago by Martin Morgan ♦♦ 20k
0
votes
1
answer
307
views
1
answer
ShortRead with BAM
shortread written 7.6 years ago by Duke210 • updated 7.6 years ago by James W. MacDonald45k
0
votes
1
answer
255
views
1
answer
Typo in ?FastqQuality help page?
shortread written 7.5 years ago by Peng Yu940 • updated 7.5 years ago by Martin Morgan ♦♦ 20k
0
votes
1
answer
324
views
1
answer
ShortRead information
shortread written 7.5 years ago by Jennifer Dupiot10 • updated 7.5 years ago by Martin Morgan ♦♦ 20k
0
votes
1
answer
588
views
1
answer
Error installing Rsamtools
shortread rsamtools written 7.5 years ago by Paul Geeleher1.3k • updated 7.5 years ago by Martin Morgan ♦♦ 20k
0
votes
2
answers
407
views
2
answers
ShortRead QA
sequencing shortread written 7.3 years ago by Alex Gutteridge650 • updated 7.3 years ago by Martin Morgan ♦♦ 20k
0
votes
1
answer
299
views
1
answer
fastq upload time
shortread written 7.2 years ago by Daniel.Berner@unibas.ch90 • updated 7.2 years ago by Sean Davis21k
0
votes
2
answers
388
views
2
answers
0
votes
1
answer
350
views
1
answer
ShortRead qa() for BAM files?
coverage alignment shortread written 7.1 years ago by wrighth260 • updated 7.1 years ago by Martin Morgan ♦♦ 20k
0
votes
1
answer
356
views
1
answer
ShortRead for sequencing data quality assessment
sequencing shortread written 7.1 years ago by heyi xiao360 • updated 7.1 years ago by Valerie Obenchain ♦♦ 6.4k
0
votes
1
answer
482
views
1
answer
0
votes
2
answers
331
views
2
answers
mismatch & replacement
shortread written 7.0 years ago by Daniel.Berner@unibas.ch90 • updated 7.0 years ago by Harris A. Jaffee590
0
votes
1
answer
442
views
1
answer
A question about ShortRead_1.8.2.tar.gz.
shortread written 6.8 years ago by xujiabao10 • updated 6.8 years ago by Dan Tenenbaum ♦♦ 8.2k
0
votes
1
answer
418
views
1
answer
A question about ShortRead_1.8.2.tar.gz.
shortread written 6.8 years ago by Dan Tenenbaum ♦♦ 8.2k • updated 6.8 years ago by Martin Morgan ♦♦ 20k
0
votes
1
answer
344
views
1
answer
Error loading ShortRead
shortread written 6.5 years ago by raffaele calogero500 • updated 6.5 years ago by Martin Morgan ♦♦ 20k
0
votes
1
answer
552
views
1
answer
shortread readAligned with BWA
go shortread written 6.3 years ago by nac280 • updated 6.3 years ago by Martin Morgan ♦♦ 20k
0
votes
1
answer
539
views
1
answer
ShortRead error when reading BAM file
shortread written 6.2 years ago by Alex Gutteridge650 • updated 6.2 years ago by Martin Morgan ♦♦ 20k
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