0
votes
1
answer
305
views
1
answer
Vignette for ShortRead
shortread written 10.0 years ago by joseph330 • updated 10.0 years ago by Martin Morgan ♦♦ 22k
0
votes
2
answers
458
views
2
answers
Solexa fastq files and BLAT
cancer biostrings shortread written 9.5 years ago by Daniel Brewer1.8k • updated 9.5 years ago by Martin Morgan ♦♦ 22k
0
votes
0
answers
429
views
0
answers
0
votes
1
answer
394
views
1
answer
0
votes
4
answers
681
views
4
answers
read coverage per transcript for RNASeq
rnaseq coverage process shortread written 8.9 years ago by Jessica Hunter40 • updated 8.9 years ago by Martin Morgan ♦♦ 22k
0
votes
2
answers
459
views
2
answers
pileup function in ShortRead package
alignment shortread written 8.8 years ago by Nora Rieber40 • updated 8.8 years ago by Martin Morgan ♦♦ 22k
0
votes
1
answer
375
views
1
answer
possible bug in extendReads() in package chipseq
alignment shortread written 8.7 years ago by Nora Rieber40 • updated 8.7 years ago by Martin Morgan ♦♦ 22k
0
votes
1
answer
397
views
1
answer
ShortRead internal: too many 'snap' entries
shortread written 8.5 years ago by Ramzi TEMANNI160 • updated 8.5 years ago by Martin Morgan ♦♦ 22k
0
votes
1
answer
375
views
1
answer
Shortread and filtering of duplicate reads
shortread written 8.5 years ago by Johannes Waage50 • updated 8.5 years ago by Martin Morgan ♦♦ 22k
0
votes
1
answer
386
views
1
answer
ShortRead with BAM
shortread written 8.2 years ago by Duke210 • updated 8.2 years ago by James W. MacDonald46k
0
votes
1
answer
303
views
1
answer
Typo in ?FastqQuality help page?
shortread written 8.2 years ago by Peng Yu940 • updated 8.2 years ago by Martin Morgan ♦♦ 22k
0
votes
1
answer
488
views
1
answer
ShortRead information
shortread written 8.1 years ago by Jennifer Dupiot10 • updated 8.1 years ago by Martin Morgan ♦♦ 22k
0
votes
1
answer
767
views
1
answer
Error installing Rsamtools
shortread rsamtools written 8.1 years ago by Paul Geeleher1.3k • updated 8.1 years ago by Martin Morgan ♦♦ 22k
0
votes
2
answers
553
views
2
answers
ShortRead QA
sequencing shortread written 8.0 years ago by Alex Gutteridge650 • updated 8.0 years ago by Martin Morgan ♦♦ 22k
0
votes
1
answer
414
views
1
answer
fastq upload time
shortread written 7.8 years ago by Daniel.Berner@unibas.ch90 • updated 7.8 years ago by Sean Davis21k
0
votes
2
answers
511
views
2
answers
0
votes
1
answer
466
views
1
answer
ShortRead qa() for BAM files?
coverage alignment shortread written 7.8 years ago by wrighth260 • updated 7.8 years ago by Martin Morgan ♦♦ 22k
0
votes
1
answer
479
views
1
answer
ShortRead for sequencing data quality assessment
sequencing shortread written 7.8 years ago by heyi xiao360 • updated 7.8 years ago by Valerie Obenchain ♦♦ 6.5k
0
votes
1
answer
598
views
1
answer
0
votes
2
answers
483
views
2
answers
mismatch & replacement
shortread written 7.7 years ago by Daniel.Berner@unibas.ch90 • updated 7.7 years ago by Harris A. Jaffee590
0
votes
1
answer
497
views
1
answer
A question about ShortRead_1.8.2.tar.gz.
shortread written 7.5 years ago by xujiabao10 • updated 7.5 years ago by Dan Tenenbaum ♦♦ 8.2k
0
votes
1
answer
539
views
1
answer
A question about ShortRead_1.8.2.tar.gz.
shortread written 7.5 years ago by Dan Tenenbaum ♦♦ 8.2k • updated 7.5 years ago by Martin Morgan ♦♦ 22k
0
votes
1
answer
457
views
1
answer
Error loading ShortRead
shortread written 7.2 years ago by raffaele calogero500 • updated 7.2 years ago by Martin Morgan ♦♦ 22k
0
votes
1
answer
678
views
1
answer
shortread readAligned with BWA
go shortread written 6.9 years ago by nac280 • updated 6.9 years ago by Martin Morgan ♦♦ 22k
0
votes
1
answer
698
views
1
answer
ShortRead error when reading BAM file
shortread written 6.8 years ago by Alex Gutteridge650 • updated 6.8 years ago by Martin Morgan ♦♦ 22k
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